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[Dear]() Blogger,
I hope this message finds you well. I’m writing to ask for your guidance regarding an issue…
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The full genome of a human contains 3 billion base pairs.
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Dear Devon,
Thank you so much for developing this great tool! My colleague recommended bwa-meth and MethylDackel to me.
Recently we developed a haplotype-resolved diploid human genome, where one…
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Hi,
I use vclust script to classify viruses into species and genera following ICTV standards.
The script of assigning viruses into putative species (tANI ≥ 95%) is:
`vclust cluster -i ani.tsv -o …
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Hello,
I am running LTR retriever, and I am coming across these errors:
`/data/00/user/user101/software/LTR_retriever/LTR_retriever/bin/get_range.pl 1 LTRretriever.genome.fna.retriever.scn LTRretrie…
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Dear
I met with such error:
[Fri Sep 20 17:27:52 2024] Enqueueing pair 2238009/2240249 (99.9%). Est. time left: 00:00:34 (hh:mm:ss)
[Fri Sep 20 17:28:47 2024] 2240249/2240249 (100%) pairs align…
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Transferred from : https://github.com/sars-cov-2-variants/lineage-proposals/issues/2149
tree: https://nextst…
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Indexing onion/garlic genome failed since the genome is 16Gb and two chromosomes are longer than 2.1 Gb.
Does BWA has a limit for sequence length?
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### Data Owner Name
National Library of Medicine
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://www.nlm.nih.gov/portals/health…
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KP.3.1.1 > > A19722G > T14961C > S:F175L (T22085C)
Query:T22085C,T14961C
Samples: 5 on Gisaid (8 on Usher with one more sample from Wales)
Places: 3 UK (GBW 2, Scotland, Wales 3) , Poland, Sloveni…