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Hi, how should we deal with formats that use multiple different files to store data? Think of formats that consist of a data file and a header file with the metadata. It makes sense to load them toget…
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I wanted to return to this discussion before we embark on our project to integrate many atlases. Currently the main tool for interacting with atlases is ITK-SNAP (its been cited over 9000 times). It …
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Hello,
When we create a feature map of any pyradiomics features, it only gives us the cropped image (equivalent to the mask). If I want to show the feature map in the foreground and the MRI sequenc…
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The development branch is used, because some features were not available in the master yet, but now we can switch to the master.
See discussion at https://github.com/SlicerDMRI/SlicerDcm2nii/issues…
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1. Splitting data (train/val/test, k-fold): could be done via column in csv
What would be the best way for the WorkbenchDataset class to switch between different splits. We could have a set_split(sp…
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I am trying to launch ephys-align, but I get the following error:
Traceback (most recent call last):
File "/opt/anaconda3/envs/iblenv/bin/ephys-align", line 8, in
sys.exit(launch_offline()…
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As discussed in JuliaLang/Color.jl#101 it seems like I can't get away anymore with silently prototyping on my own.
JuliaLang/Color.jl#101 seems to be on a good way to be resolved quickly, now the rema…
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I have 2 questions
1. Is there a command line way to extract radiomics of one specific structure using an RT-Struct file with many contours.
2. Also is it possible to do this as a batch process fo…
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Many users and developers struggle with crashes in ShapeWorks Optimize step that are the result of grooming errors and other input errors. It would be nice if the optimizer did some input verificatio…
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I'm doing some testing of a package that has `nptyping` in the dependency chain, and when I catch the warnigns as erros with pytest some warnings are coming from `nptyping`:
```python
.tox/py38/l…