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Hello
I am trying to convert Connectome to a glass brain like this figure:
![image](https://user-images.githubusercontent.com/63205413/146820339-b22c377a-cc97-4c47-bdf3-ae0c4fcda070.png)
I have so…
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Benchmark the selected experiments described in:
[Balakrishnan, G., Zhao, A., Sabuncu, M.R., Guttag, J. and Dalca, A.V., 2019. Voxelmorph: a learning framework for deformable medical image registrati…
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Hi,
We would like to hear about your thoughts about some possible improvements of UX for users of the IAV when searching for datasets.
1. Add some information in the Quick guide in order to make th…
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There are many scripts that depend on resources and other repos and on being in a git repo which need to be separated from the core so that they can be tested independently. They should be distributed…
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Consider adding to the automated pipeline the requisite steps to project the AAL atlas to subject space and construct the connectome from that.
Given that it appears as supplementary material in th…
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Hi, when using openmap t1 for segmentation with Brain tumor data there are so many empty regions in the output. How to overcome this? Are there any special preprocessing tasks to deal with tumor datas…
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We can talk about this when we meet, but I don't think we currently have the capability to ingress native space structural segmentations (e.g., subcortical structures from FS). This would prob be use…
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Hi, I try to extract VTA volume from sturctural MRI scans and get a bit stuck.
I'd like to know how to do it using T1w images only,
and using MP2RAGE scans which are available for some of my patie…
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**Describe the bug**
The bug is a mismatch between a file name that is expected versus the file name that is actually saved.
**To Reproduce**
Steps to reproduce the behavior:
Running the lead c…
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Dear Sina,
Thanks for the great contribution to the community, I am exploring the four pre-calculated structural connectivity matrices available in UKBiobank, but I couldn't find the corresponding…
hitrp updated
10 months ago