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## Problem Statement
When browsing the [PhenotypeLibrary](https://data.ohdsi.org/PhenotypeLibrary/#tab-8464-3) and viewing individual search results (e.g., "intensive services"), users might want to …
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Related to duplicated gene-disease issue #735.
Recreate: From phenotype http://beta.monarchinitiative.org/phenotype/ZP:0007522, go to Genes tab. Count is 4, but all four are the same gene/associatio…
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It would be nice to not have to enter a list of phenotypes if all you are looking to do is to compare a bunch of entities that have phenotype profiles. Eg. all orthologs of a gene. We should be able t…
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We still have:
```
ilxtr:neuron-type-sstom-11 phenotype ['ILX:0105486'] is unknown
ilxtr:neuron-type-sstom-12 phenotype ['ILX:0104003'] is unknown
ilxtr:neuron-type-sstom-13 phenotype ['ILX:010548…
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- [ ] Determination of a good similarity score that would allow us to extract the most relevant phenotypes for each disease.
- [ ] Upload the dataset somewhere to become publicly available
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Hi Team,
Appreciate if someone can advise me on this issue:
**Previous steps:**
1. SNP and COG association with fixed effects model
**Pyseer having issue:** K-mer association with mixed effec…
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for example see https://monarchinitiative.org/phenotype/HP:0000023
this is likely not a dipper bug but triaging here until we can investigate further
credit to @iimpulse for finding this
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We have species-neutral traits in OBA (all kingdoms) and TO (plant traits). OBA can be mapped to EFO, ATO, VT
What should the relationship be between OBA and upheno?
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## We have multiple _potential_ use cases for recording causal relationships between phenotypes:
* Defining phenotypes that specify aetiology - e.g. hemolytic anemia MP:0001585 DEF: deficiency of …
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Use case: we need a way to represent
1) cases where only a part of the phenotype definition in known
2) where we want to define a phenotype in terms of another, undefined phenotype which is then e…