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If I have I compare a 0/1 insertion of `TTTTTT` with 0/1 `TTTTTTA` sveval will call it a match because the sequences are almost the same.
But if I have a 1/2 insertion of `TTTTTT`, `TTTTTTA` and …
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Which build of dbSNP do these RefSNP IDs reference? I can't find code referencing the original data sources.
I need to lift over hg38 -> hg19. In the data chr:bp is only available and I require the…
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VarSim may generate read names that cannot be written into SAM or BAM format. `bwa-mem` fails to perform alignment on these reads.
```
chr13_31453404_33401170-1248109-,chr13_31453404_33401170-124819…
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Is it possible to include https://github.com/String-Latin/DIN-91379-Characters-and-Sequences dynamically?
Or just add a link.
klml updated
7 months ago
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Hi, I use flanking sequence of D6S477 as 5' and 3' anchors to call this locus, and the sample is 9948 (a standard sample in forensic). To approve the tolerance of sequecing error or SNP variants in t…
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Hello,
The WIL library defines some token classes without fixed sizes. For example:
https://github.com/microsoft/wil/blob/a8cd266d5c76a19309fdad55ebda97adb556daa8/include/wil/token_helpers.h#L38…
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Transferred from sars-cov-2-variants/lineage-proposals#1802
Found with @aviczhl2 's phylogenic tree analysis tool.
Spotted first by @aviczhl2 .
KP.3.1> A1620G(Orf1a:E452G), del29728-29776(#2646…
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I found a strange bug: I can only emit a capital `Ö` using the right shift key. The left shift key works for others letters, though.
Minimal config for testing:
```clojure
(defcfg
;; For Lin…
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Hello @maickrau,
I'm interested in deconvolving the main rDNA variants for the cell line we are working with. I've used ONT duplex data to build the DBG and the resulting graph looks fine. I obtain…
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Dear all,
Using the Enrich2 software package for the analysis of my pre-processed fastq files I run sometimes into an "IndexError: string index out of range".
```
2020-03-27 18:01:19,697 [enri…