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`sct_create_mask` generates a couple of deprecation warnings, coming from how we use `nibabel`:
```
.../spinalcordtoolbox/spinalcordtoolbox/scripts/sct_create_mask.py:227: DeprecationWarning: get_he…
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In Nibabel `4.0.0`, `nibabel.trackvis` has been removed.
Clinica has a couple pipelines that depend on it through the Nipype `mrtrix` interface (`DWWIPreprocessingUsingPhaseDiffFieldmap` and `DWIDTI`…
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Hi Matt,
When i used the qsiprep,i was confused with some questions. I sincerely hope you can solve my problems if it is convenient for you.
q1,With the default options, the pipeline only implem…
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Below we can have a detailed proposal for how to approach #35. We know there's going to have to be some canonical representation of objects as either in-memory or on-disk, and "in-memory" seems prefer…
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Goal
- The overall goal is to extend [Neuroglancer](https://github.com/google/neuroglancer) to visualize and curate tractography streamlines.
- Currently, we have scripts to read streamlines from …
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The current _progress bar_ doesn't display properly in _Jupyter notebook/labs_. We should consider using the [tqdm](https://github.com/tqdm/tqdm) progress bar.
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Hello,
I'm trying to install amico using pip with python3.10 and pip23.3.1 and get the following error:
```console
$ ./venv/bin/pip install amico
Collecting amico
Downloading amico-1.0.1.tar.…
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I am using Visual Studio 17 2022, when i try to build the proxsuite, i get template error , the configeration of project for MSVC is as follows "PS C:\Users\mesmaeil\Documents\proxsuit-m\proxsuite\bui…
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### Prerequisites
- [X] I am not using any other content blockers alongside uBO (Privacy Badger, AdGuard, Ghostery, Adblock Plus, etc.)
- [X] I verified that this is not a [known filter issue](https:…
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Hi!
I am very interested in this work and I try to train/test on other dMRI data. I tried to train on FiberCup data, ISMRM2015 data and my private human brain data respectively. However, the value o…