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**Versions**
poppunk 2.6.0
pp-sketchlib 2.1.0
**Command used and output returned**
Running poppunk in a conda environment in WSL2-Ubuntu
1206 genomes from one bacterial species (had already…
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Hi everyone, I got the error when I run Trinity. How can I resolve this?
Trinity version: Trinity-v2.8.5
-ERROR: couldn't run the network check to confirm latest Trinity software version.
Thursda…
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I have a scRNAseq samples SORTseq protocol, well plate based, I have this error when I do the run_numbat, my script only gets to do the hierarchical clustering, but then it stops, I have tried with di…
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@mbabadi has some python scripts that we can expand upon. To start, this should include:
- [ ] WES evaluations using matched WGS as GT
- [ ] WGS evaluations using consensus calls from SV callers …
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Hello,
I'm using this software for my own species(no pre-built ref genome).
./mirnovo.pl -i S1.fasta.gz -g NA -t universal_plants -o S1_small
The file S1.fasta.gz is around 200Mb, seems it's runni…
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I ran through the [vignette](https://caleblareau.github.io/gchromVAR/articles/gchromVAR_vignette.html) using my scATAC-seq data for the peaks, and I downloaded a fine-mapped posterior-probabilities fo…
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I downloaded some courses but all of them only had 360p videos. Is there any option to increase the resolution of the videos?
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Hello there, using the sample dataset I run the test run in order to see if all works, but not.
Here the command and the output i get:
> ./tools/bin/bpipe` necklace.groovy data/data.txt`
WARNING…
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Hello!
I'm new in the field and I need to use Chewbbaca In the end of the analysis, I get in a visualization folder, a file, cgMLST.tsv. Is the values in this file represent the allele distance of e…
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Hi Iñigo,
I was performing the Circle-Map Realign tutorial, and encountered a few warnings.
My command:
```
Circle-Map Realign -t 4 -i sort_circular_read_candidates.bam -qbam qname_unkno…