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May I kindly ask how to set the values of the MIN_TP and min_fg_data in the class_slice_index_gen.ipynb and config_ssl_upload.py respectively while training model on Combined Healthy Abdominal Organ S…
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**Issue
Unable to use other datasets besides Task09_Spleen from medicaldecathlon when running the spleen_segmentation_3d script.
I believe the issue is with the SpacingD, pixdim transform, but could…
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Hi , thank you very much for your great work，I have meet some trouble when I train the amos dataset，it just shows ：
l 21/240 [01:17
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Hi, I used to execute inference with TotalSegmentator high res. pre-trained model.
But after I finished the process the output image (.nii) is NOT match the organ list (like picture below).
The …
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Just a small remark/question I would like to make given that I did not find it in the previous issues. This is what I have observed so far working with nnUNet.
Giving more data to training of a nnU…
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We do not have any source images for this but on Grand Challenge we often see this error:
```
File "/opt/poetry/.venv/lib/python3.8/site-packages/panimg/panimg.py", line 40, in convert
_convert_d…
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**Is your feature request related to a problem? Please describe.**
There are some examples of MONAI MAPs with multiple models, however these are typically for different organs (e.g. liver and splee…
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* evalutils version:latest
* Python version:3.10
* Operating System:ubuntu22.04
### Description
I found that in the segmentation [example](https://comic.github.io/evalutils/index.html), the grou…