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Hi, I am trying to run the laca workflow in an execution environment where I am not allowed (nor able) to run the docker container with --privileged enabled, and therefore the steps that are run in a …
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i use singularity exec command to calculate
when i run the cylinder2D_multiprocessing example, it has finished the follow step:
OpenFOAM_init running time： 2.67 s
OpenFOAM_init running time： 2.…
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### Description of feature
My university computing cluster does not support Docker containers and instead uses singularity. Would it be possible to add a singularity container engine for this pipelin…
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Dear Felix,
Thank you for the great tool, it can really help in my current endeavour of defining de-novo cell types for atlas level data, which has several covariates. I am trying to install and run t…
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This layout pattern include both `X` and `Xs` at the same time.
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i've built a singularity container and pushed to the cloud: https://cloud.sylabs.io/library/bjarthur/default/avatarify
the definition file is as follows:
```
Bootstrap: library
From: ubuntu:2…
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So far, the routines we have are limited to the stereographic projection with ref latitude at -90° (should rather be -71° to minimise distortion but gave singularity). We should rely on Proj.jl to all…
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### Description
In the scipy's implementation of svds we can get the number of singular values to be at max equal to min(M,N) using propack solver. I needed this particular implementation in the cupy…
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Currently the singularity job type relies in `singularity exec` command.
I think this is the most general solution, but as singularity allows to hide some complexity using `singularity run` comman…
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Hi,
to get singularity to run, I've had to go into almost all cwl scripts and put "#!/usr/bin/env -S cwltool --singularity" at the top.
Now, I STILL get a problem where it's trying to call Docke…