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---
id: bionetgen
version: 2.8.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_BioNetGen/6818db0245cb46c726f248b9e95ce8a9059f477f/biosimulators.json
specificatio…
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This was identified by @bilalshaikh42. We're going to temporarily disable VCell in runBioSimulations until this is fixed.
Below is an excerpt of an error. The full error can be seen at https://run.…
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remove the input to function for this
https://github.com/biosimulations/biosimulations/blob/0a8f7697c013c8ab07069edd4cffaf1b3b06c3e4/apps/dispatch-service/src/app/services/sbatch/sbatch.service.ts#L5…
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---
id: brian2
version: 2.5.0.3
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/49a209029c515b25dc7350fce1396098f0fa817f/biosimulators-brian2.json
specif…
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See https://github.com/PMR2/pmr2.omex/issues/3
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---
id: pyneuroml
version: 0.5.20
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/49a209029c515b25dc7350fce1396098f0fa817f/biosimulators-pyneuroml.json
s…
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### Contact Details
_No response_
### Location
Other (please describe below)
### What happened?
Combine API crashes when trying to load metadata from combine archive
### What made it happen…
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---
id: neuron
version: 8.0.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/49a209029c515b25dc7350fce1396098f0fa817f/biosimulators-neuron.json
specific…
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Either
(a) Remove COMBINE archives nested in archives
OR
(b) Replace `http://purl.org/NET/mediatypes/None` with `http://identifiers.org/combine.specifications/omex`
Example:
https://gi…
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VCell now runs successfully in runBioSimulations with 5 example simulation runs. All runs terminate successfully. However, the results contain NaN for outputs of failed simulations (Euler with step si…