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We have a .fq.gz file and we tried to make "fastqc" for each read using terminal by the following commands. However, using gzip, gunzip and tar but gave error
for f in ~/ngs2/fqData/*.fq.gz;do fastqc…
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I used the commands to create a reference for AnnotSV:
```
wget http://ftp.ensembl.org/pub/release-
111/gtf/homo_sapiens/Homo_sapiens.GRCh38.111.chr.gtf.gz
wget http://hgdownload.cse.ucsc.edu/ad…
-
```
What steps will reproduce the problem?
1. gunzip R-U-Dead-Yet-v2.0.tar.gz
2. tar xvf R-U-Dead-Yet-v2.0.tar
3. Files are extracted directly the current working directory. It is normally
expected t…
-
```
What steps will reproduce the problem?
1. gunzip R-U-Dead-Yet-v2.0.tar.gz
2. tar xvf R-U-Dead-Yet-v2.0.tar
3. Files are extracted directly the current working directory. It is normally
expected t…
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I am executing the bismark on paired end data using the command: bismark --multicore 12 path/genome_dir --output_dir path/alignment -1
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Greetings,
I'm able to zip my data fine, but what about unzipping???
Would it be hard to modify the existing code and repackage the project for gunzip?
Many thanks in advance,
ghost updated
13 years ago
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When user has a lot of cache writes dspm got an error:
```
events.js:183
throw er; // Unhandled 'error' event
^
Error: unexpected end of file
at Gunzip.zlibOnError (zlib.js:153…
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Hello,
I'm trying to install on postgresql (11)+nginx+php (7.2-fpm) and I got lot of timeout issues and give up installing from web, my config was updated from web, and I kept it, I just setted `$g…
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I need to unzip files that are regular gzip files - not tar.gz or tgz. Can gzip and gunzip work with this library or do I need to create an adapter?
Thanks
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I am trying to create an index file for hg38 in Linux.
Genome=GRCh38.primary_assembly.genome
Anno=homSap_GRCh38_primary_assembly_GENCODEv41_cmp_chr
Dir=~/src/genome/homSap_hg38_GENCODEv40
cd ${D…