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https://mp.weixin.qq.com/s/X__wt_9DkcjWqkS--EkK2g
ixxmu updated
11 months ago
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We currently have the assay type `salmon_rnaseq_10x` but we need to add `salmon_sn_rnaseq_10x`:
```
{
"alt-names": ["salmon_rnaseq_10x_sn"],
"contains-pii": false,
"data_type": "salmon_sn_rnas…
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https://mp.weixin.qq.com/s/8K6Ies4oV2g8XfVpbUnLpA
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I downloaded and am using the latest xpore 2.0 release off github.
1. Basecalled all 3 replicates of each of the WT and KO Yeast SK1 from the epinano paper.
2. Used the data preparation in the do…
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https://mp.weixin.qq.com/s/s5p_qfXhsO38zaIrGFZkwg
ixxmu updated
11 months ago
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https://mp.weixin.qq.com/s/5MekQ0dXxPTI_lqgVBin4g
ixxmu updated
10 months ago
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### Description of bug
== Error == system call for: "['/public2/home/lhd1/miniconda3/bin/spades-hammer', '/public2/home/lhd1/ONT-data/mapping_results/Burkholderia_cepacia/result_assembly9Y/corrected…
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https://mp.weixin.qq.com/s/3wp-MYq3tJcOjQKWaf_7iw
ixxmu updated
9 months ago
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https://mp.weixin.qq.com/s/Ng5ZHzVo50-JgQcRJfJmSQ
ixxmu updated
9 months ago
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Hi,
As in your preprint you showed that SCALEX can also be applied to CITE-seq data, I was wondering if you could provide an example code snippet of how this can be done.
Many thanks!