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Implement a JSON export during assignment and, then, run assignment using QGIS processing provider with a function just like https://github.com/AequilibraE/qaequilibrae/pull/250 (would take the JSON a…
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### Brief description of the problem:
Here is an issue I found while using r5r, perhaps an upstream R5 issue? Originally posted: https://github.com/ipeaGIT/r5r/issues/373#issue-2156986527
When o…
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### Description
The RAFT project (https://github.com/rapidsai/raft) has several building blocks for different algorithms in the RAPIDS Analytics ecosystem and among these building blocks are spatial …
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First off, I want to say that this is a really great library! I've been using it on a lot of my single cell sequencing datasets with a lot of success.
I've been testing UMAP on a custom distance me…
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DBSCAN is already doing this, as it uses the eps value to determine the the edges of the adjacency graph. It should not be too hard to perform the same batching that DBSCAN is performing, whilst thres…
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## Description
A combined DF including both normalized counts and metadata is a convenient means of data analysis. The DF is often validated for samples having both types of data and facilitates the …
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I might be wrong here, but it looks like the scipy linkage call invoked for the dendrogram is silently producing misleading output. The function signature for linkage expects either a condensed format…
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Hello,
I was having trouble with the dist.seq command taking a long time to work and crashing at some point in the middle due to a network error, so I tried using the cluster.split command and foun…
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Hi,
Thank you for developing this package. I am having an issue where in one of my datasets after running ConQuR I see an improvement (reduction of batch in PERMANOVA R2 from 0.14 to 0.08) using th…
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Hello James,
thanks a lot for the extremely useful implementation. I am interested in using the umap function providing directly the distance matrix. I was wondering if it would be possible to extend…