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Could you please consider returning the eigenvalues in addition to the eigenvectors? They contain valuable information.
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When clicking on the final dimension in the bar-plot on the MDS plots, a graph is plotted when it should not be, the (n+1)th dimension does not exist so plotting the n vs (n+1)th dimensions produces a…
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Hi,
I tried to run kmds as per the updated instructions and received the following error:
$ kmds -p metadata.pheno --mds_concat subsampled_matrices.txt -o all_structure --threads 16 --write_distance…
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Hulls are useful for one type of display, but covariance (data) ellipses provided by
veganCovEllipse are also useful. It would not be hard to add this via an option
ellipse=T/F, as an alternative to …
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With MDS 0.5.1 the following fails:
``` python
import pandas as pd
import mdsynthesis as mds
df = pd.DataFrame({('R1', 'NZ1'): np.arange(3), ('R1', 'NZ2'): np.arange(3,0,-1),
('T2…
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#### Overview
Hello!
So I was trying to use your dimension reduction package in relation to hyperspectral imagery as you cited as an application within your benchmarks and paper. So I cloned your be…
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#### Overview
Hello!
So I was trying to use your dimension reduction pack in relation to hyperspectral imagery as you cited as an application within your benchmarks. So I cloned your repository and …
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I'll work on this on a separate fork tomorrow
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In the near future (before May 5) I plan on refactoring `plotROCRCurves` to use [plotROC](http://cran.r-project.org/web/packages/plotROC/index.html) which uses `ggplot2` instead of base graphics. This…
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Thanks for the script! We have five Mac laptop computer labs, and I'm really hopeful that this will help us keep them up to date (two of them are connected to ethernet, the other three are wireless).…