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The following table references chapters from [The Bioconductor 2018 Workshop Compilation](https://bioconductor.github.io/BiocWorkshops/).
You can see the workshop schedule that I developed [on the …
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Fix the wiki page with the correct slides links @reubenthomas
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Hi,
When I export the GO Biological Process 2023 table from a run with a background gene set, the returned results appear to be those of a run without the background set (p-values are larger than t…
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Hi,
I encounter an ERROR when running gofilter, the input generated from compareCluster function.
Did anyone meet this before?
![image](https://github.com/user-attachments/assets/4d5bac87-988f-44…
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What similarity function to implement for comparing sets of HPO terms in the gsppc (gene set phenotypic profile comparison) R notebook? The first version used Jaccard similarity. Could re-implement on…
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Hi,
I am trying to run the decoupleR pipeline for TF enrichment analysis.
Please help.
Trying the code using OmnipathR:
> net sessionInfo()
R version 4.1.0 (2021-05-18)
Platform: x86_64-pc-…
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Hello, faced another error when trying to run the CoGAPS-SpaceMarkers pipeline. Did I do something wrong when launching `getInteractingGenes`?
Full output:
```
WARNING: The requested image's pla…
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Panther has deployed its API in beta testing but with a permanent URL: http://www.pantherdb.org/services/tryItOut.jsp?url=%2Fservices%2Fapi%2Fpanther
Do we want to include a small documentation / e…
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### Prerequisites
+ [ ] Have you read [Feedback](https://guangchuangyu.github.io/clusterprofiler/#feedback) and followed the [guide](https://guangchuangyu.github.io/2016/07/how-to-bug-author/)?
*…