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In order to calculate the "actual" number of species for each higher taxon we need to pick a "true" taxonomy, because the NCBI taxonomy only records species that have been sequenced. Factors influenci…
rvosa updated
8 years ago
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There should probably be another unifurcating node in here for the order 'Erinaceomorpha', although this is more of a taxonomic feature than a phylogenetic one. It would help, however, to be able to s…
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obviously not a big deal, because this is not a real query (found it by accident):
```
curl -X POST -H "Content-Type":"application/json" -H "Accept":"application/json" http://devapi.opentreeoflife.or…
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If I do tnrs/match_names on a fossil taxa, the node id it returns refers to a bacterial taxa if I query this node with graph/node_info, is this normal?
I have tried a few fossils and it seems to alwa…
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blarg
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This is presumably an artifact, and should be somehow merged into http://tree.opentreeoflife.org/opentree/otol.draft.22@837887/Mucoromycotina
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I believe that something is wrong when using tnrs/match_names on C. elegans.
The first match is ott_id 5252840 with the unique name "Caenorhabditis elegans (in genus Burkholderia)" which would make i…
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e.g.
curl -X POST http://devapi.opentreeoflife.org/v2/tnrs/match_names -H "content-type:application/json" -d '{"names": ["Hylobates"], "context_name": "Mammals"}'
should yield Hylobates.
(currently…
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I'm currently working on it
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Even though several Vespadelus species such as this one appear in the tree. It is not even present as a non-monophyletic taxon (e.g. https://devtree.opentreeoflife.org/opentree/argus/ottol@909559/Squa…