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Dear enspara Team,
Is there a fast and efficient way to produce the holistic cross-correlation matrix? I did ti by running target_site_MI for every single residue, but it takes a long time for a la…
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**NOTE**: some of this is still in flux and when completed we can document this in more detail; this serves as a WIP design overview and tracking issue but _not_ a design doc. This works backwards fro…
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When running a test script for the QInfer/python-qinfer#129 PR, I sometimes encounter ``UnicodeDecodeError`` exceptions if I run my test using ``python -m duecredit test.py`` instead of using the ``DU…
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> Beyond sample curation and basic pathologic characterization, the digitized H&E-stained images of TCGA samples remain underutilized. To highlight this resource, we present mappings of tumor-infiltra…
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#### Description
Today I run this code about AffinityPropagation,but something strange happens. The data I used is generated by sklean.datasets. I don't know why the result in picture 7 a…
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Hi,
The program has been throwing error in bigscape_exe. I removed the environment, re-installed the bigscape env with conda. Deleted the intermediate files in bigscape_output and re-ran the program.…
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Hi - awesome program. I ran MutEnricher with docker without covariates successfully. Now I've added covariates, and it's been running for over a week without completing on 10 processors with 120GB of …
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Thanks so much for your work in this tool and for this in advance - you guys are the best!
## Short description of the problem
Running `anvi-cluster-contigs` with `DASTool `or `Binsanity `as dri…
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### Metadata
- Authors: Kuang-Jui Hsu, Yen-Yu Lin, Yung-Yu Chuang
- Organization: Acadamia Sinica & NTU
- Conference: CVPR 2019
- Paper: http://cvlab.citi.sinica.edu.tw/images/paper/cvpr-hsu19.pdf…
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We want Starfish to natively and seamlessly support 3D images. There are several TODOs in the code where this transition has not been made yet.