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@thoni56, I was trying to create a [profile README] for the [Alan-IF] organization, but GitHub didn't automatically detect the repository as matching my profile because I'm logged as @tajmone:
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**What would you like to be added**:
Grype should download a smaller file during it's database update, probably by using .zstd compression on the current database schema.
**Why is this needed**:…
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For the scoreset page, if the parent experiment has a raw read identifier, link out to SRA/ERA/DDBJ, GEO, or Array Express. Code is maintained by idutils, but alan wrote it. It is intentional that sco…
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## Describe the bug
It's 2-in-1 problem.
At first, image raw data (for example, `doc.pages[1].images[0]['stream'].rawdata`) is broken. PIL Image `PIL.Image.open(io.BytesIO(doc.pages[1].images[0]…
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A quick reminder on some of the extra assets that were part of the StdLib distribution and might need to be updated or temporarily omitted from the `v2.2.0` release. And some further notes on assets t…
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# Goal Title
_What will this work achieve?_
Ensure that codebase is kept up-to-date with bug fixes, security updates, external API changes etc.
## Description
- Ensure that DSH code is always deploya…
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We need to add the Seshat: Global History Databank to the Research Software Directory (RSD) to increase its visibility, impact, and reuse within the research community. This will also ensure proper ci…
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Dear team,
Thank you so much for the package, it is really useful.
However, I am curious if you can simulate both spatial and condition effects using sc3design? I have a comparative spatial experi…
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**Submitting author:** @AlanPearl (Alan Pearl)
**Repository:** https://github.com/AlanPearl/diffopt
**Branch with paper.md** (empty if default branch): paper
**Version:** v1.0.0
**Editor:** Pending
**…
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The Azure API gives us multiple usage items that have the same ID. We combine them into one item, for various reasons. The method we use to combine them can be seen here:
https://github.com/alan-tu…