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**Lab Name**: Bioinformatics and Data Science in Biotechnology Lab
**Department**: Biotechnology and Biomedical Engineering
**List of Experiments and Repositories**:
1: Writing and…
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Dear bcbio community,
In 2011, the Harvard Chan Bioinformatics Core began developing bcbio as an open-source framework to tackle challenges in reproducibility and scalability in the field of next-g…
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# Title
Integration of open-source AI models in Galaxy (web-based scientific data analysis platform)
# Description
[Galaxy (Europe)](https://usegalaxy.eu/) is a web-based, open-source data anal…
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### Need
MSI analysis was requested to be included to the workflow in https://github.com/Clinical-Genomics/BALSAMIC/issues/972
### Suggested approach
Add [MSIsensor-pro](https://github.com/x…
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The workflow seems to fail quickly on the IRIDA web application side and the Galaxy log suggests staramr is failing due to a problem executing tool: dataset_collections:
`There was a failure execu…
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Dear Alexander Lab.
I'm trying to setup EukHeist for detecting microalgae from snow samples, and I'm having some trouble.
I'd appreciate some help!
After installing and running my samples I'm…
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The verifier should be way more expressive about fails etc, too. E.g.:
```
beacon-verifier http://progenetix.org/beacon
```
... giving e.g. a
```
"Bioinformatics analysis": [
{
…
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Given many students are not particularly interested in bioinformatics, consider ways to integrate bioinformatics in many courses. This also links biology content to analysis. It does not preclude a se…
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```
http://bcbio.wordpress.com/2013/05/22/scaling-variant-detection-pipelines-for-wh
ole-genome-sequencing-analysis/
```
Original issue reported on code.google.com by `geo...@marsel.is` on 28 May 2…