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First of all, thank you for making these scripts available. This is not really an issue, is more a request for clarification of the tool's output. I am witting here to that others with the same proble…
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Hi there, I've recieved the follwing issue when running virsorter2
[2020-12-18 05:43 INFO] # of seqs < 1000 bp and removed: 0
[2020-12-18 05:43 INFO] # of circular seqs: 1294
[2020-12-18 05:43 INFO…
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I'm also getting a similar error for bulk-RNA data,
```
> bam_files
MCAO1 MCAO3 MCAO4 Shame1
"../…
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Hi,
I have a set of paired-end reads from bacterial RNA. Since the reference genome I'm using has a gene that's overlapping between the beginning and the end of the chromosome, I was wondering how ST…
EBosi updated
3 years ago
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Hey!
First of all, really appreciate virsorter (the first and also this followup tool).
With the novel classification, I came across the fact that (circular) mitochondrial sequences are consiste…
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The user should be able to input refseqs from the latest NCBI database v82 (ftp://ftp.ncbi.nlm.nih.gov/refseq/release/) to be able to index, use in alignment, and possibly even derive circular feature…
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My memory is 256GB ; however, I got the following message:
[Tue 2022-06-21 07:11:12] [INFO ] Input reads: SRR9856190_1_val_1.fq.gz,SRR9856190_2_val_2.fq.gz
[Tue 2022-06-21 07:11:12] [INFO ] Library …
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When I run `cargo build` I get the same error as described in https://github.com/ViennaRNA/ViennaRNA/issues/215. What is the suggested workaround? Is it okay to downgrade to ViennaRNA 2.5.x or is ther…
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* **Term to be merged: Provide GO ID and term label**
cap-dependent translational initiation
GO:0002191
* **Which term do you propose this term merge into? Provide GO ID and term label**
cytopla…
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Implement generators for the following exercises:
* [X] `hello-world` (#203)
* [X] `leap` (#212)
* [X] `collatz-conjecture` (#214)
* [X] `rna-transcription` (#218)
* [X] `bob` (#219)
* [X] `ha…
NobbZ updated
5 years ago