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我已经有MLDE和Input文件的内…
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Hey guys,
Thank you for the great tool. I was using the tool to look over some kraken2 results and was unsure what the Clade counts vs Taxon counts meant. I see the read numbers for both these option…
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Languoids identified as Level=Family do not have a 'classification' row in ValueTable, despite having all the other rows (subclassification etc).
Here is a random small family, note that there's no…
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**Describe the bug**
When I mouse over clade Raoellidae, the explorer goes white and I have to use the back arrow to escape it.
**To Reproduce**
1. Search for clade Raoellidae
2. Mouse over clad…
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**Hemimastix should not be in Kingdom Animalia**
The genus Hemimastix (taxon ID 4898981) should not be placed within the Animalia but is a protist within the clade Hemimastigophora.
The original de…
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Hi @schultzm, this looks like a very useful tool and thank you for bringing this out. Do you know if this would also work for resolving polytomies in IQ-TREE or RAxML output files? From my quick testi…
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Here is a quick script I have used for this before.
```
# This script generates predictions for the gbq_qr_hhs_only model for all reference dates.
# Retrospective model fits are generated using t…
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Click a clade and display statistics (i.e. what taxa are within this clade, is there more than one of a certain genus/common group and if so what percent are represented in this clade)
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Polytomies in the default Spiral view are drawn in light grey but the stems of the leafs are drawn in dark grey. This includes midnodes that are children of polytomies. I wonder if it'd be clearer of …
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Hi Uyen,
Many thanks again for implementing the "whitelisting" option! I would like to ask whether it would also be possible to implement an option to partition TreeShrink analyses by clade. In my …