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Some montages of the 6 top and the 6 bottom slices:
https://www.dropbox.com/s/z3akt7ug29d8spa/Background_Montages.zip?dl=0
Looking at these, I could imagine it would be smart to sample pixels in …
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cc @RainerHeintzmann @BioTurboNick
Hey all,
I was wondering whether it makes sense to introduce different microscopy types, objectives and sensors.
I'm thinking about composing microscopes fro…
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> Also, regarding multidimensionality. Is time lapse handled somehow? I was just looking at one big INCarta folder, with 4D data, >90000 files, and all time-lapse steps are in the same folder (t1... t…
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Dear Mr. mkitti,
I followed your instruction provided and tried to run your code in MATLAB.
Unfortunately, it didn't work. In command window, it stated as follow;
>> performAnalysis
Unable to …
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i) Create a separate neurodata type for OpticChannels, rather than them being a special thing generated by the ImagingPlane table
This will give the ability to reuse the same optic channels across …
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@ssgpers @manerotoni @seadaisy
Do you happen have example images, which are:
- 2D
- There is a treatment and a control image with a clear difference in the number and/or shape of objects
- One n…
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.. and what should our name be?
Are we about microscopy in python? Or data acquisition in biosciences? Or data acquisition in general? Something else entirely?
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With the help of @fadero we confirmed that the convention of the deskew code in the on-the-fly image processor isn't what I was expecting. Tagging @nicost and @henrypinkard due to their involvement, …
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Hi,
My images was acquired by a Zeiss confocal microscope and saved images as ome.tiff. When I tried to load the file in julia, I got this error:
```jl
julia> load(movingfns[10]) …
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As you will see, this issue has been a long-time coming :grimacing:. Now that we are discussing NAPs (#4299), the home page (#4275, #4191), and "who napari is for" (https://github.com/napari/napari/pu…