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Kindly comment on this issue why you are interested in this mini-project
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Hi, I got an error: "FileNotFoundError: [Errno 2] No such file or directory: 'output_cmscan.txt'".
How can I get this problem solved ?
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If I have files output from AA and AC, is there a way for me to experiment with the cycle view /genome browser to investigate potential larger structures formed from my cycles/paths? Would be good if …
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We used this transformation in a paper in preparation, it would be great to add this functionality to pycytominer to enable all future users access!
cc @jatinarora-upmc @shntnu
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Hi,
I attempted running `crass` on my data. The the command below was issued followed by the STDOUT:
```
$ crass -o /scratch/users/snarayanasamy/LAO_TS_CRISPR/D20/crass_mg-reads /scratch/users/snara…
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Hi,
I used Flute as a follow up to the mageck pipeline (mageck count -> mageck mle). In comparison to the mle values, the Flute normalization by cell cycle increases the absolute value of the beta s…
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Hi,
I am trying CB2 analysis in R to analyze my CRISPR data.
The package is installed properly (I guess) and example data runs fine.
When I am trying my own data, I can load the files correctly. bu…
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From the file in issue #7 [MorphMap_gene_gene_scoring_data_with_CRISPR.xlsx](https://github.com/broadinstitute/2023_12_JUMP_data_only_vignettes/files/13844874/MorphMap_gene_gene_scoring_data_with_CRI…
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Hi Philipp,
How do I run these scripts on Linux? The Web-application is not working. Uploading data at http://pinapl-py.ucsd.edu is very slow, and the file cannot be uploaded successfully. Could yo…
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Hi!
Our team at ViQi Inc. have been doing ML analysis on the cpg0012 dataset with a lot of success. We would now like to move on to the jump dataset cpg0016 and possibly cpg0004. However, I cannot…