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cytomining
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pycytominer
Python package for processing image-based profiling data
https://pycytominer.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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WIP: Improve Documentation for Non-CellProfiler Datasets in Pycytominer
#430
axiomcura
opened
1 hour ago
0
Add dark mode style color for contrast in docs
#429
d33bs
opened
1 day ago
0
Increase color contrast for links color with rendered docs in dark-mode
#428
d33bs
opened
4 days ago
0
FeatureRequest: Machine Learning Data Split Functionality
#427
MikeLippincott
opened
2 weeks ago
3
build(deps): bump aiohttp from 3.9.4 to 3.10.2
#426
dependabot[bot]
closed
3 weeks ago
0
build(deps-dev): bump webob from 1.8.7 to 1.8.8
#425
dependabot[bot]
closed
3 weeks ago
0
build(deps-dev): bump setuptools from 69.2.0 to 70.0.0
#424
dependabot[bot]
closed
1 month ago
0
build(deps-dev): bump zipp from 3.18.1 to 3.19.1
#423
dependabot[bot]
closed
2 months ago
0
build(deps-dev): bump certifi from 2024.2.2 to 2024.7.4
#422
dependabot[bot]
closed
2 months ago
0
bug(compartments): avoid lowercase compartment strings
#421
d33bs
closed
2 months ago
1
build(deps): bump urllib3 from 1.26.18 to 1.26.19
#420
dependabot[bot]
closed
2 months ago
0
build(deps-dev): bump requests from 2.31.0 to 2.32.2
#419
dependabot[bot]
closed
2 months ago
0
GH Actions Docker errors for user credentials with login when triggered from Dependabot
#418
d33bs
closed
2 months ago
3
build(deps-dev): bump tornado from 6.4 to 6.4.1
#417
dependabot[bot]
closed
2 months ago
1
build(deps-dev): bump requests from 2.31.0 to 2.32.0
#416
dependabot[bot]
closed
2 months ago
2
fix(pandas): add condition for pandas config
#415
d33bs
closed
3 months ago
1
Bug: get an error in pycytominer/__init__.py it was fixed coming back to the previous commit
#414
PaulaLlanos
closed
2 months ago
12
build(deps-dev): bump jinja2 from 3.1.3 to 3.1.4
#413
dependabot[bot]
closed
2 months ago
1
Bug: `infer_cp_features()` Function Fails to Capture Features If the Compartment Name Contains Multi-Case Letters
#412
axiomcura
closed
2 months ago
0
ci(runners): specify GitHub Actions Ubuntu runner image
#411
d33bs
closed
4 months ago
1
Update `ubuntu-latest` to specific version for GH Actions os specifications
#410
d33bs
closed
4 months ago
0
docs(docker): add docker installation instructions
#409
d33bs
closed
4 months ago
1
ci(runners): update macos version for python
#408
d33bs
closed
4 months ago
3
refactor(pd): avoid dataframe fragmentation in agg
#407
d33bs
closed
4 months ago
1
Resolve MacOS Python setup issues within GitHub Actions runner images after recent update
#406
d33bs
closed
4 months ago
0
build(deps): bump aiohttp from 3.9.3 to 3.9.4
#405
dependabot[bot]
closed
4 months ago
0
FeatureRequest: address Pandas DataFrame fragmentation warnings from tests
#404
d33bs
closed
4 months ago
0
build(deps): bump idna from 3.6 to 3.7
#403
dependabot[bot]
closed
5 months ago
0
fix(poetry): add tool.setuptools_scm section
#402
d33bs
closed
5 months ago
1
refactor(pandas): enable copy_on_write for Pandas
#401
d33bs
closed
5 months ago
1
Add `tool.setuptools_scm` section to `pyproject.toml` file to avoid Poetry warnings
#400
d33bs
closed
5 months ago
0
Complete Docker-Sponsored Open Source (DSOS) application process
#399
d33bs
opened
5 months ago
2
fix(ci): docker image push readme updates
#398
d33bs
closed
5 months ago
3
Isolate tests for Dockerfile builds using Poetry build includes/excludes
#397
d33bs
opened
5 months ago
0
docs: add pydocsstyle linting and switch to mkdocs
#396
kenibrewer
opened
5 months ago
1
fix(ci): docker image push fixes
#395
d33bs
closed
5 months ago
4
[Refactor] Address S108 violations (unsafe /tmp usage) in `cyto_utils.collate`
#394
kenibrewer
opened
5 months ago
0
[Refactor] Address S603 violations in pycytominer
#393
kenibrewer
opened
5 months ago
0
[Refactor] Address S101 violations in cyto_utils
#392
kenibrewer
opened
5 months ago
0
feat(dev): add improved makefile with additional helper commands
#391
kenibrewer
closed
4 months ago
1
Align versioning of ruff in pre-commit and dev dependencies using local hooks
#390
kenibrewer
opened
5 months ago
0
Refactor/apply isort linting checks
#389
kenibrewer
closed
5 months ago
1
refactor: apply bugbears linting checks
#388
kenibrewer
opened
5 months ago
0
refactor: apply bandit checks
#387
kenibrewer
closed
5 months ago
1
refactor: update ruff to 0.3.4
#386
kenibrewer
closed
5 months ago
1
Check if downloaded file is empty
#385
shntnu
opened
5 months ago
1
FeatureRequest: Automatically generated dataframe schemas to catch errors
#384
kenibrewer
opened
5 months ago
0
feat(core): add models and class for pycytominer core
#383
kenibrewer
opened
5 months ago
6
bug: Failing docs build
#382
kenibrewer
opened
5 months ago
4
dev: add docker-in-docker feature to devcontainer
#381
kenibrewer
closed
5 months ago
1
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