-
-
Hello,
First of all, fantastic work with the pipeline implementation.
There are some functionalities, that I'd love to see in the pipeline, which can initiate some collaboration as well.
1. hav…
-
### Prerequisites
+ [ ] Have you read [Feedback](https://guangchuangyu.github.io/dose/#feedback) and follow the [guide](https://guangchuangyu.github.io/2016/07/how-to-bug-author/)?
* [ ] make sur…
-
In the Li 2018, [Cell](10.1016/j.cell.2018.11.043) publication they find a continuum between cytotoxic cells and cell expression exhaustion markers. They also show that cells expression markers of wha…
-
These comments pertain to the panther site not GO, but the user ends up here when they do an enrichment so I think it's important to make some clarification from a GO point of view
* http://www.pa…
-
The following table references chapters from [The Bioconductor 2018 Workshop Compilation](https://bioconductor.github.io/BiocWorkshops/).
You can see the workshop schedule that I developed [on the …
-
Hi,
Thank you for this great package. I am trying to run GSEA with custom genesets in a .gmt file. My input gene list contains roughly ~18k genes. For each GSEA the program takes a really long time…
-
Hi Tobias,
Thank you for creating the ITAG4.1 GO annotation for tomato! This is a valuable resource for the plant research community.
I am currently using your annotation to perform GO enric…
-
Hi,
Just to be sure.
I calculated the functional enrichment for my own 12 functional categories (I followed the tutorial that you gave for cell-type specific annotations). I took the final Z-s…
-
Reply with learning objectives (and challenges to test them, if possible).