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All iNat Observation fields are listed in the initial comment.
But some should (also) be mapped to MO fields
###Tasks
- [x] Review iNat obss in [2023 NEMF List](https://docs.google.com/spreadsheets/d…
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Hi,
I noticed that the fungi and protozoan databases don't come with the --standard kraken2 build, so I built and added those databases to the MY_KRAKEN2_DB library folder hoping that they would a…
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**Summary**
This proposal supports the mobilisation of specimen-based occurrence data from Australian macrofungi
specimens collected by renowned mycologist and fungi photographer Bruce Fuhrer OAM (19…
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Good evening.
Is there a way to prevent certain Factions from being blended? I have the [Fungi Lite Mod](https://steamcommunity.com/sharedfiles/filedetails/?id=2129406860&searchtext=fungi) and I ke…
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Hi
So after all settings in config.yml
I ran
python3 run_Wochenende.py arpit_R1.fastq --aligner bwamem --readType PE --metagenome 2021_12_meta_fungi_human_masked --threads 144 --no_abr…
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Can you maybe do a training for the ITS2 database that is commonly used by a lot of folks? It has ~370000 sequences and some working groups lack the computational resources. That would be great.
I am…
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Authorstrings in fungi names in the CoL currently are a hybrid between ICZN and botanical Code picked by Index Fungorum. Decide whether to follow this approach or use a strict botanical style.
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Hello,
Please I would like to know if I can create my own database with fungi included.
Also, I am using RefSeq224 data files which are *.fna.gz will the command pick that instead of the fa.gz in …
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### (v0.18.6 for Minecraft 1.19.2)
This applies for huge fungi too (warped & crimson trees)
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Hi,
I had the need to make a subset (**subsetTax** function) of several taxa (phyla), but the **tax** parameter doesn't accept lists. So I had to do a subset by taxon, it took a while but it was po…