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## Description
Add support for `h5ad_alevin` in the api.
### Steps
1. Add the file type in `signedUrl.js`
2. Update request validation in `CreateSamples.v2.yaml`
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I tried installing anndata into R using both install.packages("anndata", lib="PATH"). I am able to load the package with library(anndata), but when I read my file with read_h5ad, I get the following e…
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I've tried with a smaller subset of the gitlab_merfish_lung.h5ad file, but it does not help.
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Hello,
I would like to access the .h5ad data files for analysis with python.
I tried downloading the .h5ad files from the AWS bucket, but these files are on GLACIER storage. I don't have the per…
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**User story**
**Preferred solution**
- [ ] Implement for OME-Zarr, MuData-Zarr, and SpatialData-Zarr
- [ ] Implement for Genomic Profiles - see https://github.com/vitessce/vitessce/issues/1856…
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I'm trying to run the `data_processors/infer_truth` component in [`openproblems-bio/task_cell_cell_communication`](https://github.com/openproblems-bio/task_cell_cell_communication) project. This code …
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Hello! I am trying to run the tutorial of scMINER using the typical 10x format files (matrix, features or genes, barcodes) that are included in the MICA package (\MICA\test_data\inputs\10x\PBMC\3k\fil…
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HI,
I want to convert h5ad to seurat object by seuratdisk.
**But even using tutorial data , i met errors:**
Error in dfile$obj_copy_from(src_loc = source, src_name = "obs", dst_name = "meta…
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Hello, Developer,
I encountered an issue while trying to save my integrated data as an h5ad file. Interestingly, I can save it as an h5ms file without any problems. Could you please explain why thi…
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Hi,
I am currently trying to combine my processed Visium and scRNAseq data using the multimodal run. Following the tutorial I was able to process the data and was able to see the combine feature (G…