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czbiohub-sf
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tabula-muris
Code and annotations for the Tabula Muris single-cell transcriptomic dataset.
https://www.nature.com/articles/s41586-018-0590-4
BSD 3-Clause "New" or "Revised" License
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10x data SRA without technical UMI or Cellbarcode reads
#257
emiliosk
opened
1 month ago
0
updated / repo being maintained
#256
kenneditodd
opened
1 month ago
2
Unable to download .h5ad data
#254
miguelreinacampos
opened
10 months ago
7
How can I find the sranumber from the annotationsfiles?
#253
TdzBAS
opened
1 year ago
0
rownumber of countmatrix and metafile does not match
#252
TdzBAS
opened
1 year ago
0
Cell annotation
#251
strawberry098
closed
1 year ago
3
Update LICENSE
#250
AhmetCanSolak
closed
1 year ago
0
js for data interaction website
#249
jessegmeyerlab
closed
1 year ago
4
CreateSeuratObject
#248
fengyt0831
opened
1 year ago
4
Error: division by zero
#247
pocession
closed
2 years ago
1
raw counts matrix with mitochondrial genes
#246
IdRose
closed
2 years ago
3
Download data from aws s3
#245
pocession
closed
2 years ago
12
raw data in GSE109774 lacking 10x libraries
#244
zyh4482
closed
2 years ago
1
Which gtf version used for the analysis?
#243
Hemantcnaik
closed
2 years ago
1
Mapping gene names to ENSEMBL IDs
#242
anamariaelek
closed
2 years ago
1
Lung and Trachea
#241
vsarsam
opened
2 years ago
0
Gene - Tissue - Cell Type association
#240
MathiasBeller
closed
2 years ago
2
04_figure4: empty folder?
#239
wangcc0218
opened
2 years ago
1
How do I find the cell ID for each SRA ID?
#238
ustinovm
closed
3 years ago
0
Genes missing from HTML browser ?
#237
agow123
opened
3 years ago
0
Access denied for downloading data files
#236
naskomit
closed
2 years ago
2
Seurat object for entire integrated FACS dataset (ie what was used for Fig. 2)?
#235
evaknichols
closed
2 years ago
3
Invalid path for windows
#234
chiwwong
closed
2 years ago
3
looking for genome annotation used (mm10plus)
#233
ChristophH
closed
2 years ago
6
Way more cells available on SRA for FACS sorted Tongue
#232
ftucos
closed
3 years ago
1
Sample 10X_P7_7 causing cellranger error
#231
gouinK
closed
3 years ago
4
AWS fastq file metadata
#230
gouinK
closed
4 years ago
4
Transcription factor analysis for Fig 5
#229
singcell
closed
3 years ago
1
A question about Bladder-counts data and their annotations in FACS data of Tabula-Muris
#228
AllenWu18
closed
4 years ago
3
Can I use one or two figures from the data
#227
vijaykumarmuley
closed
3 years ago
1
download_robj.Rmd not found
#226
Enerald
closed
3 years ago
1
Gene Names
#225
osolari
closed
4 years ago
2
Shiny App code
#224
jungminchoilab
closed
4 years ago
5
Where can I find the raw unprocessed reads?
#223
FalkoHof
closed
4 years ago
12
Which version of Seurat you are using
#222
beyondpie
closed
3 years ago
2
Mitochondrial encoded genes
#221
jmzvillarreal
closed
5 years ago
10
where can i find a merged data for all 20 types tissue
#220
YidingZhang117
closed
3 years ago
6
Mouse ID Annotation
#219
davisidarta
closed
5 years ago
3
Fixed file name typo, and added type_convert()
#218
fumi-github
opened
5 years ago
0
Questions about the droplet data of lung and Trachea in figshare
#217
liuqivandy
closed
3 years ago
1
Missing genes
#216
amisharin
closed
5 years ago
4
missing Aorta and Diaphragm bam files from aws s3 or EBI
#215
ygidtu
closed
5 years ago
1
can't access the aorta and diaphragm data
#214
zhou-ran
closed
5 years ago
0
Question regarding Figshare data and AWS data
#213
hojaeklee
closed
2 years ago
8
Enable Users to Find Cell Types Before Dowload
#212
DarioS
closed
3 years ago
1
Large_Intestine-counts.csv missing from figshare
#211
jasonserviss
closed
3 years ago
1
Installation - Python Failed!
#210
Fang-Kevin
closed
6 years ago
4
Delete tabula-muris.Rproj
#209
aopisco
closed
6 years ago
0
Update SexBreakdown.Rmd
#208
aopisco
opened
6 years ago
0
Update Reclustering.Rmd
#207
aopisco
opened
6 years ago
0
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