czbiohub-sf tabula-muris issues

czbiohub-sf / tabula-muris

Code and annotations for the Tabula Muris single-cell transcriptomic dataset.

https://www.nature.com/articles/s41586-018-0590-4

BSD 3-Clause "New" or "Revised" License

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issues

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Delete AWS resources

#255 kyleawayan opened 1 week ago
0
Unable to download .h5ad data

#254 miguelreinacampos opened 8 months ago
4
How can I find the sranumber from the annotationsfiles?

#253 TdzBAS opened 1 year ago
0
rownumber of countmatrix and metafile does not match

#252 TdzBAS opened 1 year ago
0
Cell annotation

#251 strawberry098 closed 1 year ago
3
Update LICENSE

#250 AhmetCanSolak closed 1 year ago
0
js for data interaction website

#249 jessegmeyerlab closed 1 year ago
4
CreateSeuratObject

#248 fengyt0831 opened 1 year ago
4
Error: division by zero

#247 pocession closed 2 years ago
1
raw counts matrix with mitochondrial genes

#246 IdRose closed 2 years ago
3
Download data from aws s3

#245 pocession closed 2 years ago
12
raw data in GSE109774 lacking 10x libraries

#244 zyh4482 closed 2 years ago
1
Which gtf version used for the analysis?

#243 Hemantcnaik closed 2 years ago
1
Mapping gene names to ENSEMBL IDs

#242 anamariaelek closed 2 years ago
1
Lung and Trachea

#241 vsarsam opened 2 years ago
0
Gene - Tissue - Cell Type association

#240 MathiasBeller closed 2 years ago
2
04_figure4: empty folder?

#239 wangcc0218 opened 2 years ago
1
How do I find the cell ID for each SRA ID?

#238 ustinovm closed 2 years ago
0
Genes missing from HTML browser ?

#237 agow123 opened 3 years ago
0
Access denied for downloading data files

#236 naskomit closed 2 years ago
2
Seurat object for entire integrated FACS dataset (ie what was used for Fig. 2)?

#235 evaknichols closed 2 years ago
3
Invalid path for windows

#234 chiwwong closed 2 years ago
3
looking for genome annotation used (mm10plus)

#233 ChristophH closed 2 years ago
6
Way more cells available on SRA for FACS sorted Tongue

#232 ftucos closed 3 years ago
1
Sample 10X_P7_7 causing cellranger error

#231 gouinK closed 3 years ago
4
AWS fastq file metadata

#230 gouinK closed 3 years ago
4
Transcription factor analysis for Fig 5

#229 singcell closed 3 years ago
1
A question about Bladder-counts data and their annotations in FACS data of Tabula-Muris

#228 AllenWu18 closed 3 years ago
3
Can I use one or two figures from the data

#227 vijaykumarmuley closed 3 years ago
1
download_robj.Rmd not found

#226 Enerald closed 3 years ago
1
Gene Names

#225 osolari closed 4 years ago
2
Shiny App code

#224 jungminchoilab closed 3 years ago
5
Where can I find the raw unprocessed reads?

#223 FalkoHof closed 3 years ago
12
Which version of Seurat you are using

#222 beyondpie closed 3 years ago
2
Mitochondrial encoded genes

#221 jmzvillarreal closed 5 years ago
10
where can i find a merged data for all 20 types tissue

#220 YidingZhang117 closed 3 years ago
6
Mouse ID Annotation

#219 davisidarta closed 5 years ago
3
Fixed file name typo, and added type_convert()

#218 fumi-github opened 5 years ago
0
Questions about the droplet data of lung and Trachea in figshare

#217 liuqivandy closed 3 years ago
1
Missing genes

#216 amisharin closed 5 years ago
4
missing Aorta and Diaphragm bam files from aws s3 or EBI

#215 ygidtu closed 5 years ago
1
can't access the aorta and diaphragm data

#214 zhou-ran closed 5 years ago
0
Question regarding Figshare data and AWS data

#213 hojaeklee closed 2 years ago
8
Enable Users to Find Cell Types Before Dowload

#212 DarioS closed 3 years ago
1
Large_Intestine-counts.csv missing from figshare

#211 jasonserviss closed 3 years ago
1
Installation - Python Failed!

#210 Fang-Kevin closed 5 years ago
4
Delete tabula-muris.Rproj

#209 aopisco closed 6 years ago
0
Update SexBreakdown.Rmd

#208 aopisco opened 6 years ago
0
Update Reclustering.Rmd

#207 aopisco opened 6 years ago
0
Update README.md

#206 aopisco closed 6 years ago
0