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Hello，I am interested in your article and your idea is awesome. But i have some problems with debuging your codes, in do_elastix_registration.py, where_to _run is set to 'local' . I use a way to finis…
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eg
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I have been looking at the Oncotree resource and noticed that MONDO provides xrefs to it. Oncotree is organized in a way that at the top level, it lists tissues (e.g., LUNG, PANCREAS, etc.) and all de…
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Thanks for an excellent work including useful stata code.
**RE: Diabetes:**
The following ICD10 codes are not included in the classification:
E106, E108, E109, E118, E119, E128, E129, E138, E139,…
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The PMID:25211582 has not been integrated into `human_protein_citations_mutation_literature.csv` because it has been replaced with PMID:25296354 (https://pubmed.ncbi.nlm.nih.gov/25296354/).
In the…
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Richard's group has similarity score mappings between LungMap and HCLA lung datasets. We should load these in ASAP. This will be precedent for loading FRmatch or other similarity scores more general…
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The lung microbiome in HIV-positive patients with active pulmonary tuberculosis - Veronica Ueckermann –
Scientific Reports
https://www.nature.com/articles/s41598-022-12970-3
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I've tried with a smaller subset of the gitlab_merfish_lung.h5ad file, but it does not help.
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**This is a awesome ripo, Thank you @wasserth for this.**
Im using on my laptop with a intel core i7 with no gpu in it . python==3.10, torch==2.4.0 , i tried using the totalsegmentator v2.3.0 still…
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**Is your feature request related to a problem? Please describe.**
CARE gathers all underlying medical conditions the patient has (Comorbidities) in the patient registration form, under medical histo…