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Running Kraken2 on 2 million samples with a 256-GB DB with our infrastructure is more challenging than I previously thought, here I describe some (incomplete) preliminary tests and benchmarks.
## K…
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Hi @futianfan , thanks for sharing this wonderful piece of work!
I'd like to reproduce the RGA experiment results, but found that pre-specified `center_x, center_y, center_z` would be needed for each…
qky18 updated
9 months ago
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貼吧活動:(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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Hi,
Alexander Gabel ,
It is a great honor to use the pipeline for phylostratigraphy that you shared.
However, I have recently had just one problem using your shared pipeline for phylostratigr…
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siderophore transmembrane transporter activity (GO:0015343)
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: siderophore-iron(out) + H…
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Hi @edeutsch, here are several examples for you to improve the NodeSynonymizer:
1. There are around 53,441 nodes in KG2.5.1C of which the category!=`biolink:Disease`/`biolink:PhenotypicFeature`/`bi…
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hey @jodyphelan when I ran these SRA Accession Number on TB-Profiler_v4.0.1, v4.0.1, v4.0.2, v4.0.3 in conda Package and Docker Container it is showing that it is sensitive for all drugs, while these …
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For new term requests, please provide the following information:
## Preferred term label
Enhances host inflammasome activation
Examples:
1. Alpha-hemolysin from Staphylococcus aureus activat…
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**Submitting author:** @chrisamiller (Christopher A. Miller)
**Repository:** https://github.com/genome/bam-readcount
**Version:** 1.0
**Editor:** @lpantano
**Reviewers:** @friedue
**Managing EiC:** A…
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Posting Amy's journal here, since she is having some trouble with her GitHub account.
NEW COMMENT
### **Medicine 1: Rifabutin**
I have recently completed the entire set of challenges for the dru…