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Do inputs need to be wrapped in ${...} when used in a script? What is good practise?
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**ep1**
I get this output from the script, which is different to the course material. Might be good if the output number wasn't 0?
```
(nf-training) bobturner@tubby:~/nf-training$ nextflow run word…
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### What happened?
When using `viash ns build --setup cb`, the docker build is not being executed for a component that has a docker engine specified and only the nextflow runner (executable runner is…
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Hello, I'm running the nextflow pipeline with the command:
```
nextflow run salzmanlab/compactors \
-r main \
-latest \
-profile test,docker \
--fastq_samplesheet INPUT/samples…
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### Description of the bug
I am running into an issue when running hybrid assembly with ONT long reads and Illumina short reads. The error is at line 429 in readassembly.nf and states that 'QC_2.out'…
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### Description of the bug
Get "bash: singularity: command not found" when running pipeline on slurm
### Command used and terminal output
```console
nextflow run nf-core/raredisease -r "patch" -pro…
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## New feature
When using Azure batch in Nextflow, there currently exists the options `azure.retryPolicy.*` for configuring the behaviour of Azure API request retries: https://www.nextflow.io/docs/…
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**Is your feature request related to a problem? Please describe.**
See https://github.com/dockstore/dockstore/issues/5917
Engine versions will be more useful than distinction between DSL1/2 (presume…
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@bu-bgregor
Hey Brian,
I have some information regarding our GUI tests not terminating:
1. Adding "killall Xvfb" to the test.qsub does resolve the issue.
2. I found the following two Gith…
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### Ask away!
Hi, I'm attempting to run the workflow with nextflow + apptainer and keep getting the error message:
```
ERROR ~ Error executing process > 'pipeline:getVersions'
Caused by:
Fa…