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I have two data sets of single-cell transcriptomes: snrna and sprna, where snrna was obtained under Seurat v4.3 and sprna was obtained under Seurat v5. I use the same code, as shown below.
```
W3.2…
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Hello,
I have a problem when making the graphs, there is something wrong with the color so no graph is generated. Below are the warning message.
> CellDimPlot(
+ srt = Exp1, group.by = "seura…
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非常感谢您制作这款包，我为每个细胞类型指定了颜色，但是函数还是会按照颜色顺序而不是指定的细胞类型所对应的顺序上色
```r
library(Seurat)
library(scplotter)
data(pancreas_sub)
Idents(pancreas_sub)
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Hi,
When I run Velocity analysis with the pancreas_sub data,
```
pancreas_sub
jphe updated
5 months ago
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### Labels
[BUG][MINOR]
### Description
Doctors replaced my pancreas twice, asymptomatic pancreatis did not dissapear
### Steps to reproduce
1) Eat a lot of Mabie Nott's jelly beans w…
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TCIA seems to be CT of pancreas and the result of preprocessing should be in CSVs/Pancreas, but they are actually in CSVs/Spleen. I wonder if it is because mask=1 is Spleen in BTCV but Pancreas in TCI…
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Universal PTV:
Cutoffs are based on all patients. There are 2 groups: 90% below and 90% above.
Female low PTV burden: green
Female high PTV burden: purple
Male low PTV burden: blue
Male high PTV …
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Hello there,
I encountered an error while running PAGA analysis:
######PAGA analysis#######
pancreas_sub