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Hi there!
I would like to apply Cellchat spatial analysis on CosMX data.
```
#READ SLIDE DATA AND SELECT SPECIFIC FOV
nano.obj__3_filter = readRDS("nano.obj__3_filter.RDS")
seurat_object
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I understand that there is no correct set of Bayes Factor thresholds, but is there a 'JASP recommended' scale? The advice in Wagenmakers et al (2018) and Doorn et al (2020), point to Bayes Factor thre…
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Initially we are using a ridge detection method to analyze the actin filament networks in cell images, but it has come to my attention that there is a field in actin fialments which uses Stretching Op…
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Hi I wanted to inquire on the specification of the models for this package, I'm trying to implement the Bayesian model from the MixAK extension "lcMethodMixAK_GLMM"
my data:
HDX(deuterium exchang…
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### The problem you're addressing (if any)
The problem at hand is the lack of a comprehensive tool within the Dasharo Tools Suite that can evaluate the feasibility of porting coreboot to a given hard…
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First of all, thanks for a creating such a great tool.
I've been exploring some of the noise support recently and ran into an issue. It seems that the sign of the PSD contribution of `white_noise()…
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[Van den Berge et al, Genome Biol 2019](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1406-4) argue that using a Zero-inflated negative binomial (ZINB) model significantly boosts…
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Setup sim struct
```
>> sim_struct = Lee2015initSimStruct
sim_struct =
struct with fields:
solver: 'euler'
tspan: [0 3000]
dsfact:…
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after running code like this, the result of some SNPs are NA, here I included 10 PCs here, and include interaction between each SNPs with those 10 PCs. When I only include interaction of SNP with 2 PC…
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I have tried to fix this but looks like funannotate compare needs .faa files that doesnt recognise even when I place them in the same directory
/pangenome_out# more funannotate-compare.log
[08/22/…