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We need public implementations of the features from [Paulson et al.](https://linkinghub.elsevier.com/retrieve/pii/S0378775322001495), Table 1
Implement the following features
- [ ] Median curren…
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I am trying to use mCross to detect RNA motifs for an RBP using the alternative approach that skips the top n-mer detection step. I provide FASTA sequences for background and peak signals directly. Ho…
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Hello, I have a question you might know a quick answer to.
When plugging my data into the tutorial script, I notice that only one participant's data returns a NaN muPaf value as well as other parame…
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- Brian to start investigating the specific physionet tools that will need to be imported to the research environment for participants to use, e.g. peak detection algorithms, HRV generation, WFDB libr…
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possible feature request. I find myself wanting EIC chromatograms for detected peaks with some regularity, for different reasons. Going back and getting the EIC values for each feature is (relative…
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Based off of discussion here #315 and the request to create a separate feature request post.
Without the use of grouping + `fillChromPeaks()`, a simple + integrated way to perform _a targeted secon…
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In `fit_peaks()`, the moving average values to test list (`ma_perc_list`) starts at 5 %. Signals with high DC values related to the AC component (e.g. some PPG signals) add a high value to test so tha…
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Hi,
I'm trying to detect peaks in my GPC (gel permeation chromatography) data.
However, no peak was detected in HappyTools. Does anyone know the reason or the proper setting?
Screenshot and data ar…
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I was running 4 samples (90MB total size) in elmaven and was trying automated feature detection. I noticed that it is using 9.4GB RAM of my computer on only 4 samples.
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Hi,
I utilized exomePeak2 for peak detection in RNA samples and observed that many methylated regions corresponded to introns. This finding surprised me since I did not specify the mode argument, a…