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From branch 6 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1771
LB.1.7+G22132T(S:R190S)
GISAID query: G22132T, G22111T, C4784T, -22096,-16376,-11109, G11727A
No. of seqs: 17…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1899
KP.3.2+G25617A+G11761A, T21653C(S:S31P)
GISAID query: G11761A, T21653C, G25617A
No. of seqs: 14(China 9(Hubei, Gansu, …
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transferred from: https://github.com/sars-cov-2-variants/lineage-proposals/issues/1653
![image](https://github.com/user-attachments/assets/d2a20d2c-531c-4dc8-bd3b-9df2b31961bc)
tree: https://nextstr…
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**Defining Mutations:** `LB.1` > `G8083A(ORF1a:M2606I), C22281T(S:T240I), C22995G(S:T478R)`
**Query:** `G8083A, C22281T, C22995G`
**Earliest seq:** 24-05-24 (`EPI_ISL_19188794`, Texas, USA)
**Lates…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1757
KP.2.6+C22883T(S:L441F)
GISAID query: T21752A,C22883T,G17334T
No .of seqs: 50(Australia 1 Canada 3 UK 6 France 1 German…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1650 and https://github.com/sars-cov-2-variants/lineage-proposals/issues/1576
There seems to be a new S:S31F branch that emerges…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1777
KP.1.1.5+C8619T(Orf1a:A2785V)+T18547C,C13335T(Orf1a:A4357V)+C23601A(S:S680Y)
GISAID query: T18547C,C13335T,C23601A
No. …
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1843
KP.2.3(with 31del)+C28714T+C11518T+C25083T(S:A1174V)
GISAID query: C28714T, C11518T, C25083T
No. of seqs: 104(Belgium 1…
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Hi there,
I created a PanGraph of 200 SARS-CoV-2 sequences using FASTA sequences as input, and it seems that eleven of them aren't represented incorrectly in the JSON file. I have uploaded the data…
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Since SARS-CoV (which caused the [2002–2004 SARS outbreak](https://en.wikipedia.org/wiki/2002%E2%80%932004_SARS_outbreak)) is better studied than SARS-CoV-2 a lot of knowledge can be mapped from there…