-
Hi,
I have been trying to use a custom made StarDist model to process multiple files through the batcher. I get an error "Model file path is not set." in the batcher log window.
![image](https:…
-
Hi,
I'm trying to switch from TrackMate to Ilastik for cell tracking. I've figured out how to classify my cells and run the tracker, however once the tracking is run the only feedback is randomly c…
-
I had some difficulties to track spots that were moving a significant amount between frames. I enhanced the Kalman Tracker to be able to track fast particles with a prevalent direction.
This is done …
-
- [ ] Release a version of imglib2-ij with everything under package `net.imglib2.ij`.
- [ ] Identify dependent projects.
- [ ] For each dependent project: Use new imglib2-ij version in POM
- [ ] Fo…
-
Hi, I am receiving an error message when I use the plugin. I have downloaded it according to the installation settings and I have Trackmate enabled in my Fiji installation (ImageJ 1.53o. I have tried …
-
I have some time lapse data with manually corrected labels as outputs from TrackMate in XML format. Is it possible to load these tracks into ELEPHANT to jump-start the generation of more annotations?
-
@tinevez , just noticed that trackmate has unreadable fonts on a 4K display on Linux. Here is a comparison to a regular scijava command prompt:
![image](https://user-images.githubusercontent.com/…
tferr updated
2 years ago
-
As for now, the library has one reader (`[readfile.py](https://github.com/CellMigStandOrg/cell_track_dpkg/blob/master/dpkg/readfile.py)`), which reads file input depending on tracking software used:
…
-
Using `napari-imagej` `main` + Fiji-future, the [puncta segmentation example](https://napari.imagej.net/en/stable/examples/scripting.html) fails for me. Based on the stack trace (below) this may just …
-
Posting this here based on my [question ](https://forum.image.sc/t/export-trackmate-tracks-on-max-z-projection-for-3d-time-series-data/64487/3) on image.sc. This seems like it could be a useful enhanc…