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Hi,
Thank you so much for your effort in developing and maintaining such a wonderful tool!
I am currently working on using WGS sequencing data for CNV calling, but I don’t have any normal samp…
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Hi Juliana, Thank you for sharing your genetic QC pipeline—it has been incredibly helpful. I have a question regarding whole-genome sequencing (WGS) data. Due to its large size, it's often to separate…
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This was posted by an external user:
I am harmonizing WGS data for the GREGoR consortium using the WGS single sample workflow (in dragen_mode) on AnVIL. I've hit a parsing error when reprocessing …
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Hi,
I am trying to use PBSIM3 to simulate HiFi Revio reads from a simulated reference genome with some insertions of interest. I use the following command:
```
pbsim
--strategy wgs
--genom…
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Hello from Bologna, Italy! This is the first Issue I open on GitHub :)
I've been trying to solve a problem for days. I downloaded and imported 4 bioclimatic variables from CHELSA for 3 different mo…
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Hello,
Thank you for developing this great tool. I am wondering if I can use mutation calls from WGS. Thank you.
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> As I understand it mavlink only specifies AMSL for all but a few cases (i.e. wherever you're using a global frame [MAV_FRAME_GLOBAL](https://mavlink.io/en/messages/common.html#MAV_FRAME_GLOBAL). Tha…
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Thanks for developing this nice pipeline. I'm trying to use it for WGS data.
In the wiki page (https://github.com/cbg-ethz/NGS-pipe/wiki/Installation-&-Testing), I saw the the command lines for WGS …
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Hello, I tried to run strelka on a wgs dataset with matched tumor and normal tissue, i also fed in the smallindels file from manta but unfortunately the result vcf files are all empty. The header of t…
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Tried to run dragmap, the commands are:
` dragen-os -r /paedyl01/disk1/yangyxt/indexed_genome/hg19 -1 /paedyl01/disk1/yangyxt/wgs/40_samples_help/download_data/clean/TCA-082A/forward_read/TCA-082A-54…