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broadinstitute
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warp
WDL Analysis Research Pipelines
https://broadinstitute.github.io/warp
BSD 3-Clause "New" or "Revised" License
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[DRAFT] TSPS-183 Beagle imputation hg38 wdl and associated support wdls
#1333
mmorgantaylor
opened
17 hours ago
4
basename fix for imputation beagle ref panel generation
#1332
mmorgantaylor
closed
17 hours ago
1
parsing error in WGS single sample workflow
#1331
ekiernan
opened
20 hours ago
1
Make ReblockGVCFs more robust to large inputs
#1330
meganshand
opened
3 days ago
12
Release Automation Branch Detection Fix
#1329
kevinpalis
closed
4 days ago
3
Keep running into this error when running IlluminaGenotypingArray.wdl (/usr/lib/libstdc++.so.6: no version information available (required by /usr/gitc/iaap/iaap-cli/iaap-cli))
#1328
seetarajpara
opened
5 days ago
0
Np remove ss2 testing
#1327
nikellepetrillo
closed
19 hours ago
10
PD-2664: Add warp-develop-release-to-github to Github Actions
#1326
aawdeh
closed
6 days ago
3
PD-2664: Add warp-develop-release-to-github to Github Actions
#1325
aawdeh
closed
6 days ago
3
Testing
#1324
aawdeh
closed
6 days ago
11
Testing
#1323
aawdeh
closed
1 week ago
3
Testing
#1322
aawdeh
closed
1 week ago
3
Testing
#1321
aawdeh
closed
1 week ago
6
Testing
#1320
aawdeh
closed
1 week ago
3
PD-2664: Add warp-develop-release-to-github to Github Actions
#1319
aawdeh
closed
6 days ago
55
Staging -> master
#1318
nikellepetrillo
closed
4 days ago
4
Dev -> Staging
#1317
nikellepetrillo
closed
1 week ago
6
added nhash_id to multiome, optimus, paired-tag, and atac
#1316
ekiernan
closed
4 days ago
35
Np add disk and mem to CalculateReadGroupChecksum
#1315
nikellepetrillo
closed
1 week ago
9
Kp adding version txt automation pd 2596
#1314
kevinpalis
closed
1 week ago
6
updating gatk to version 4.6.0.0
#1313
meganshand
opened
2 weeks ago
16
Update Pipeline Versions file GH Actions
#1312
kevinpalis
closed
2 weeks ago
21
Updated Paired-tag Readme
#1311
ekiernan
closed
2 weeks ago
3
Staging -> master
#1310
nikellepetrillo
closed
2 weeks ago
5
dev -> staging
#1309
nikellepetrillo
closed
2 weeks ago
3
Np ek fix paired tag tests
#1308
nikellepetrillo
closed
1 week ago
22
Staging -> master
#1307
nikellepetrillo
closed
2 weeks ago
3
dev -> staging
#1306
nikellepetrillo
closed
2 weeks ago
3
Np update changelog
#1305
nikellepetrillo
closed
2 weeks ago
3
Np add warp prod release to GitHub to GitHub actions
#1304
nikellepetrillo
closed
6 days ago
19
Multiome keeper cell metrics
#1303
ekiernan
closed
2 weeks ago
33
Staging -> master
#1302
nikellepetrillo
closed
2 weeks ago
4
dev -> staging
#1301
nikellepetrillo
closed
3 weeks ago
3
Kp test framework pt1 pd 2645
#1300
kevinpalis
opened
4 weeks ago
21
Azurize Cell Bender in Multiome
#1299
aawdeh
closed
1 week ago
6
PD-2675-Adding-cellFilter-EmptyDrops_CR
#1298
ekiernan
closed
2 weeks ago
21
PD-2660: Output files at cell level
#1297
aawdeh
closed
2 weeks ago
172
TSPS-142 updates to help creating simulated reference panel and running imputation against it
#1296
jsotobroad
closed
1 month ago
1
Np testing multiome
#1295
nikellepetrillo
closed
1 month ago
3
Np azurized wdls add error to multiome
#1294
nikellepetrillo
closed
4 weeks ago
1
adding scientific tests
#1293
ekiernan
closed
1 month ago
12
dev --> staging
#1292
ekiernan
closed
1 month ago
3
Delete 10k_pbmc.json
#1291
ekiernan
closed
1 month ago
3
Km doc updates
#1290
kayleemathews
closed
1 month ago
6
Np make vm size an input to multiome
#1289
nikellepetrillo
closed
3 weeks ago
6
TSPS-241 Clean up beagle wdl
#1288
jsotobroad
closed
1 month ago
1
staging --> master
#1287
ekiernan
closed
1 month ago
10
dev --> staging
#1286
ekiernan
closed
1 month ago
3
TSPS-221 remove index input and add seed to make beagle tool deterministic
#1285
jsotobroad
closed
1 month ago
1
correcting JSON input name to BI015 for ATAC data
#1284
ekiernan
closed
1 month ago
6
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