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yukiteruono
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pbsim3
PBSIM3: a simulator for all types of PacBio and ONT long reads
GNU General Public License v2.0
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How to get the sam output file?
#29
tanger-code
opened
1 month ago
5
line 8: 341073 Segmentation fault
#28
tanger-code
closed
1 month ago
2
ERROR: fastq is too long. Max acceptable length is 1000000.
#27
DayTimeMouse
opened
1 month ago
5
HiFi Read Generation is Prohibitively Slow
#26
jwalewski
closed
2 months ago
4
Improvement for HiFi : relate number of passes to dna fragment size
#25
Sebastien-Raguideau
opened
2 months ago
2
simulated sequences with Ns
#24
zya067025
opened
3 months ago
1
PBSIM3 Doesn't Allow References >1 Billion Nucleotides Long
#23
jwalewski
closed
3 months ago
3
fix sequence orientation in maf
#22
ocxtal
opened
4 months ago
0
weird EP distribution in QSHMM-ONT-HQ.model
#21
ocxtal
closed
3 months ago
6
remove unused variables
#20
ocxtal
opened
4 months ago
0
fix fprintf format specifiers
#19
ocxtal
opened
4 months ago
0
fix out of bound accesses
#18
ocxtal
opened
4 months ago
1
[Feature Request] Generate all HiFi reads in a single file per sample
#17
jwalewski
opened
4 months ago
2
"ERROR: length parameters are not appropriate." On WGS quality score simulation
#16
jwalewski
closed
4 months ago
6
Quality score VS Error models
#15
pabloangulo7
opened
4 months ago
1
Simulation of Rolling Circle Amplification Data
#14
Le1223
opened
6 months ago
1
Question about tagging sam files with transcript ID
#13
nadjano
closed
6 months ago
2
PacBio and ONT new models
#12
farchaab
closed
6 months ago
6
hifi reads origin position
#11
zhuyixin43
opened
8 months ago
3
downstream hifi read stimulation
#10
zhuyixin43
closed
8 months ago
7
About read length in multi-pass read simulation
#9
wzboy1984
opened
8 months ago
3
PacBio HiFi reads simulation
#8
kisarur
closed
1 year ago
3
Sequences Length
#7
ChristosMatzoros
closed
1 year ago
2
Generating simulated HiFi reads for a specific region
#6
Jong-hun-Park
closed
1 year ago
2
PbSim3 vs PbSim2
#5
m5imunovic
closed
1 year ago
3
Introducing faux heterozygosity
#4
casparbein
opened
1 year ago
1
Benchmarking running time for simulation
#3
casparbein
closed
1 year ago
2
samtools flagstat 0% mapped with SAM file produced by multipass
#2
rudigaspardo
opened
1 year ago
3
About the max length of simulated HIFI read
#1
11malong
opened
1 year ago
2