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Hi Jiekai Lab - thank you for developing such great resouce!
I keep on having an issue to create custom genomes for scRNA analysis. Even when I run the example data with:
scTE_build -te ./Data/TE.…
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Hello, first thank you for developing such great tools
I am Ruba PhD student in Germany and I am doing scRNAseq analysis for my data, I wanted to check the velocity and so I generated the loom files …
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From Beth:
I have been thinking about how to cater the current GWAS for Anvil. Here are my thoughts:
Currently, biggest difference between these GWAS tutorials we are creating is how to navigate th…
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A user in [GHelp](https://help.galaxyproject.org/t/no-option-available-to-select-the-reference-genome/7272) requested the hg38 genome in BWA-meth, required for the [DNA Methylation data analysis](http…
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Hello Ben,
Thank you very much for your DMRichR package.
I am working with a non-model species and would like to use your package. I have followed your advice (issues #37 and #63) to generate m…
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Hi team, I'm Alma Garcia, a MS in Genome Science and Technology student. I'm in this class because I'm interested in strengthening my data analysis and visualization skills. @AdeshBaral1 @Apsara421 @c…
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Hi, Thanks for your software.
I have more accurate genome size estimation with Genomescope v1.
V1:
http://qb.cshl.edu/genomescope/analysis.php?code=S3AEp7xDGl31cq4agjOa
V2
http://qb.…
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- in the previous analysis, only minikraken database was used for computational purpose
- however, for the accuracy of the evaluation, both **standard database for kraken2** and a **custom database b…
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Hi,
First, thank for you tools. I run the `biser` on a genome assembly with 25 chromosome-level scaffolds and 1983 short contigs (the longest contig is ~ 300kb and the shortest is ~2kb). The `biser` …
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Hi! Afrendeiro!
I am using NuMap to produce phasogram. There are two files called phasogram:
1. ./MNase_seq_analysis/dist_plots/whole_genome/phasogram.txt
0 12820795 3114419 853573 278341 10795…