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Hi,
Aribba v2.1.0 was run on a patient's sample, and the output was unexpected. I reran it with the latest v2.4.0, and the result was the same. I would appreciate some explanation for the output. I'v…
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Can someone please help me with this error:
```
Traceback (most recent call last):
File "/usr/lib64/python3.11/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **k…
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Hello interested contributors! Welcome to the `covid19-review` project. Our goal here is to provide an up-to-date perspective on the current peer reviewed and preprinted literature around diagnostics …
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https://mp.weixin.qq.com/s/pVYLIkqI48DpWFJSEekoxA
ixxmu updated
4 months ago
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I found another issue which I can't quite figure out yet.
In the `bilateral.py` there is the option to set up tumor edge symmetry (e.g. for a "tumor on the midline" model). However, assigning new…
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I am trying to load in some contigs from a BD Rhapsody run, but keep getting the following error:
```r
contigs_dir
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Hi,
I have installed the Beacon 2 RI and imported the Cineca test dataset from the GUI RI. I can query the endpoints "individuals", "biosamples" and "g_variants" and I can do filtering.
I would …
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Mary Newhauser from Wiley discussed having set-up weak supervision rules for identifying SDG-related topics. Perhaps we can include these too.
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Dear Marcos (or any other SigProfilerAssignmentR developer),
I'm coming across the following error message even after adjusting my MAF file according to the example you pointed me to at https://osf…
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Recall of somatic InDel calling with Strelka is not really great.
For example, in DX2111010_01 a deletion of chr7:55174708-55174831 with 5%AF is not called.
Possible solutions:
- try to find bett…