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- iJO1366
- iAF1260
- RECON1
@jslu9 Can you put the other ones here?
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## capturing the discussion so it won't be lost. We've noticed that JBrowse performance after the December release is VERY variable (from slow, to veeeerrrrrryyyyy slow - as in minutes) and doesn't …
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I am following the directions from https://github.com/katholt/srst2#using-the-vfbd-virulence-factor-database-with-srst2 to generate a VFDB gene database for Mycobacterium. I have already run these com…
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We still need to create a HMM for adenylation domains based on (Beer et al., 2014) boundaries and Maryland seed domains.
In order to achieve this, while also extending the database at the same time, …
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Details to follow.
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Based on the Investigations column on the current elCID system.
- [x] significant organism y/n :
- [x] Organism details
- [x] Antimicrobial susceptibility
- [x] Did we retrieve y/n
- [x] Date retrie…
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The pathways for target/compound/publication API calls return error code 500 when the pathway_organism parameter is defined (e.g. with Homo sapiens). It works fine in the general "Pathways: List" call…
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Hi,
I am trying to get the taxonomy after a blast search and I came across your biopython scripts which they did look very promising.
Ihave tried them with a Mac 10.8.3 with python and biopython ins…