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The testing development version of ape can be obtained with the following.
```R
download.packages("ape", ".", repos = "http://ape-package.ird.fr/")
```
Some specific changes have been flagged …
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Official announcement is on our lab website: https://callahanlab.cvm.ncsu.edu/opportunities/
> A postdoctoral scientist position (2+ years) is available in Prof. Benjamin Callahan’s at North Caroli…
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Hi Donovan,
May I ask you for some brief help on the following questions?:
1) What is actually the best measure/estimate for bin abundance in my 23 samples? Is it percentage of mapped reads, mea…
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explore different curves and summary statistics with litterFitter
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Hi everyone,
I'm trying to use mothur pipeline to analyze my metagenome data.
I have paired-end sequencing data of 16S rRNA gene.
I performed chimera.uchime() function in mothur.
However, it mak…
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Hi,
the following exception occurs when I try to process some data:
Processing 76968876 unmapped reads of length 100.
1. Quality Control...
--filtered 24 low quality reads
Traceback (most rec…
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Post your lay and scientific abstracts below. Aim for a maximum of 250 words for both. Thanks!
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https://mothur.org/forum/viewtopic.php?f=4&t=10407&p=19978#p19978
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Hi,
I was using `rop-imrep.sh` script and got the following error before the process finished:
```
BLAST Database error: No alias or index file found for nucleotide database [/local/poslavsky/…
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High-throughput sequencing methods for characterizing e.g., soil microbial communities generate data matrices of 'sites' (or samples) as rows, and operational taxonomic units (OTUs) as columns. Values…