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Normalize the LOVD truth set from https://github.com/amycoffin/litSearchTruthsetTesting so it can be compared against the output of the crawler.
-
**Example 1:**
https://mygene.info/v3/query?q=type_of_gene:protein-coding%20AND%20BRCA&entrezonly=true&size=100&species=human&suggest_from=symbol%5E2,alias
Expected to return `BRCA2`
**Example …
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I was looking to show off MONDO browsing in the website, but am a bit hesitant because the highest-level groupings seem a bit too granular, inconsistent. Thoughts? @cmungall
https://monarchinitiat…
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Hello,
Thank you for the amazing package.
I works for me fine for couple of gene lists but for a list perform.query() works fine but when I run compute.oncoscore() it produces this error:
Error i…
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This could be an issue in the EKB agent or it could be an issue in INDRA's TRIPS processor. Either way, this is incorrect:
```
(REQUEST :CONTENT (BUILD-MODEL :DESCRIPTION "
ONT::BIND
O…
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Hi
I'm trying to predict on my own pan-cancer mutation data (or train, both have the same error). During runtime, at the randomForest step
`python 2020plus.py --log-level=INFO train -d .7 -o 1.0 -…
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When running the sub-command 'classify' of 2020plus.py, I encounter the following error:
****************************************
AN ERROR HAS OCCURRED: check the log file
***********************…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/dpique/oncomix
Confirm the following by editing e…
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currently ~ 300+ evidence items, should be much higher
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Running the following request:
```
curl http://localhost:5000/biograph_genes?where=%7B%22gene_symbol%22:%20%22EGFR%22%7D
```
results in a different reply than previously:
```
{
"_items": …