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Hi @picciama
I'm using Oktoberfest to generate a prosit library using a semi tryptic library of uniprot proteome. Here is the output including the error.
2024-02-06 08:43:03,224 - INFO - oktobe…
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I have the following 2 errors in my GO error log:
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but…
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This is not allowed according to GO rules (gorule-0000039, see http://snapshot.geneontology.org/reports/assigned-by-ComplexPortal-report.html#gorule-0000039)
Emailed Sandra.
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if A is orthologous to Y
and
B is orthologous to Y
then A and B are paralogs
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S4 doamin also present in IMP3 (not cytoplasmic
ribosomal)
http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YHR148W
Reported by: ValWood
Original Ticket: "geneontology/annotation-issues/90":https:/…
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Dear author:
I am going to create custom hexamer table
```
-c CODING_FILE, --cod=CODING_FILE
Coding sequence (must be CDS without UTR, i.e.
from …
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This is a child of mitochondrion organization, but that seems wrong, it isn't organizing the mitochondrion, it's digestng it.
@pgaudet are you OK for me to remove this in my next editing session?
…
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### Motivation
Users need a visual indication of the internal state of Cells to differentiate them and understand what they are doing. So, to achieve #16 , we must implement a visual representation fo…
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Have you considered implementing a 3D cellpose-based anatomical ROI detection approach?
We have noticed with the ribosome-tethered indicators in single plane imaging modes that the anatomical ROI d…
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Hi Fabio,
When I ran psite() function, I meet error: Error in if ((extremity == "auto" & ((best_from3_tab[, perc] > best_from5_tab[, :
argument is of length zero. Calls: psite
I realize that…