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It looks like Arriba is missing most of the time most of IGH fusions.
For example, it is very well known in published scientific literature that MUTZ-5 cancer cell line harbors IGH-CRLF2 fusion, as…
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VCF allows any structural variant to be reported in `BND` notation. There is no difference between a breakpoint-based caller report a variant as a `` and the caller reporting the same breakpoint in `B…
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Hi, this is my first post here in GitHub!
I would like to know which is the problem with my code as I get this warning when I try to carry a path analysis using piecewiseSEM. I am self taught stud…
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**Open split detail view** is greyed out
**To Reproduce**
## Add assembly
```
cd ~/.config/@jbrowse/desktop
jbrowse add-assembly https://s3.amazonaws.com/wormbase-modencode/fasta/cu…
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It is quite regular cases and there are many such modules which are producucing dururing `python setup.py build` command DSO loadable module for example using cython. As I wrote it is quite regular t…
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| Q | A
| --------------------| ---------------
| PHPUnit version | 9.5.2
| PHP version | 7.4.15
| Installation Method | Composer
```
asm89/stack-cors …
amcsi updated
3 years ago
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We ran SCRAMble on NA12878 dataset and compared the output with NA12878 validation data.
* Using original data from ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/phase3/integrated_sv_map/ALL.wgs.mergedS…
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**Describe the bug**
Just upgraded to graphql_flutter: `^4.0.0-beta.3`. What I did is a normal query as I did before.
I'm not sure what is the problem.
```graphql
query {
userByToken {
…
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Hi,
I would like to use sv-callers for calling **germlineSVs** from WGS. I have following doubts:
1. Is this tool can be installed in local centos7 machine? And whether the sv callers like manta…
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Hi,
I used delly to call structural variants on my WGS data. There is one deletion detected by delly interested me and I did cnv graphs by lowresbam2raster (http://lindenb.github.io/jvarkit/LowResB…