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delly
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
BSD 3-Clause "New" or "Revised" License
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Questions: delly genotype for SR and RV
#385
zhangshouwei309194
opened
2 weeks ago
0
Is there any parameter to determine sex in delly cnv?
#384
zyxNo1
opened
1 month ago
0
Interpreting confidence intervals
#383
weewus
opened
1 month ago
3
Using PacBio/pbsv VCF for delly force genotyping (-v)?
#382
bbimber
opened
1 month ago
0
Segmentation Fault : core dump occurred
#381
BIOJHK
opened
1 month ago
2
Parallelization issue for somatic sv calling pipeline
#380
CHOWDHURY098
opened
2 months ago
1
Problem installing Delly
#379
briarj
opened
2 months ago
1
Inquiry on Using Delly for Identifying Transgene Insertion Sites in Mouse Genome
#378
Zeyu618
opened
2 months ago
2
VCF FOMAT information
#377
wang-wldlsw
opened
2 months ago
0
Genotyping a given SV VCF with Delly
#376
rickymagner
opened
2 months ago
1
true translocation or not with 3to3 CT tag
#375
asaki1986
opened
3 months ago
0
Error thrown during split-read assembly
#374
eeshaanrehani
opened
3 months ago
1
core dumped error with -d sv_support.gz
#373
YichaoOU
opened
3 months ago
0
Question about delly's selectInversions() function in short-read call
#372
q-wind
closed
3 months ago
3
RDCN tag in Delly vcf output
#371
themkdemiiir
opened
4 months ago
4
Delly breakend format for translocations not "pairwise"?
#370
cmdcolin
closed
4 months ago
7
Question: blacklist map location
#369
sarahdada
opened
4 months ago
1
How can I interpret germline CNVs? (Updated)
#368
removedraft
closed
5 months ago
1
Delly cnv and rd.R output
#367
ErickTong
opened
5 months ago
1
Command not found
#366
removedraft
closed
5 months ago
1
ALT field only contains symbolic <INS>, <DEL>, ... tags instead of actual ALT nucleotide sequence
#365
JoannaTan
opened
5 months ago
0
about somatic SV calling
#364
dongjuleem
opened
5 months ago
0
somatic pre filtering issue
#363
NidhiAgrawal27
closed
5 months ago
2
min and max SV size
#362
skeremaydin
closed
5 months ago
3
merging vcfs of various SV types (delly or bcftools?)
#361
shaghayeghsoudi
closed
5 months ago
2
Somatic CNA's with tumor purity
#360
yashcrux
opened
6 months ago
3
Question about Algorithm Updates in Delly V2
#359
ipstone
opened
6 months ago
1
Delly vcf output
#358
Ana1335
opened
6 months ago
3
END position changed between delly 1.1.6 and 1.1.7
#357
Stikus
closed
6 months ago
2
Delly call output --only have one type of SV (Deletions)
#356
XIAO2Mark
closed
5 months ago
1
Delly call on WGS data
#355
Ceonham
closed
8 months ago
3
Realignment and break points
#354
mmnikolic
opened
9 months ago
3
call CNV using a PON
#353
lmanchon
closed
5 months ago
1
MAPQ quality threshold
#352
AriadnaColmeneroCobo
closed
10 months ago
1
Please increase the window size. Coverage is too low! error
#351
rezenman
opened
10 months ago
0
One SV with two records
#350
jackzhong1995
closed
5 months ago
1
Two INV just differ by only 1 base
#349
jackzhong1995
closed
10 months ago
4
How to calculate the Fusion mutation frequency from the known information in VCF?
#348
RADIOMUMM
closed
9 months ago
1
Why SRs are reported when no PEs are indicated
#347
AriadnaColmeneroCobo
closed
10 months ago
1
how to merge the SV into genome
#346
tinyfallen
closed
10 months ago
3
Delly call sv by ont long-reads
#345
jackzhong1995
closed
10 months ago
2
About the INS sequence in vcf output
#344
ClarenceHsiang
opened
10 months ago
4
About the output format
#343
ClarenceHsiang
closed
10 months ago
2
SVLEN missing in output / INSLEN in all output
#342
NicolaLady
opened
10 months ago
1
SV calling
#341
fangling0913
opened
10 months ago
0
1
#340
xxxww11
closed
10 months ago
0
Excluded regions
#339
bounlu
opened
11 months ago
1
`BAM` file type
#338
bounlu
closed
11 months ago
3
Delly on WGBS data
#337
bounlu
opened
11 months ago
1
Creating a mappability map
#336
Immortal2333
opened
11 months ago
1
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