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```
cd '/home/hxr/work/tools-iuc/tools/hmmer3' && git rev-parse HEAD
cd '/home/hxr/work/tools-iuc/tools/hmmer3' && git diff --quiet
Repository hmmer_hmmemit updated successfully.
cd '/home/hxr/work/to…
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Hi there,
I've just started playing with parsing some hmmer output files (hmmsearch), and have run across a rare situation that causes the parser to choke. I think the issue arises where the subject…
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When trying to run the mini test run after a fresh install via pip, I ran into an error at the "Populating search tables in the latest annotation database using default HMM profiles" step. This was du…
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Hi,
I've installed Interpro on my Mac OS X and have attempted to execute a test run from my terminal as follows:
$ ./interproscan.sh -f TSV -i ~/Documents/interproscan-5.18-57.0/test_proteins_new.fa…
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Maybe this has been reported before or it is in the pipeline but a quick search here in the issues list didn't show much. This bug is reproduced with the lasted git version.
If phmmer runs with the `…
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```
This is what I try:
> interproscan.sh -i test.fa -f tsv --goterms --pathways
Welcome to InterProScan 5RC4
Running the following analyses:
[jobProDom-2006.1, jobPanther-7.2, jobGene3d-3.3.0, jobSMA…
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```
InterProScan version 5.9-50.0 is affected by this.
The PIRSF matches itself are OK and valid, but the Evalue shown in the result
files (TSV, GFF3 or XML) is incorrect.
It doesn't matter if you …
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There is now a new location for the HMMER3 web serivces. They got moved from Janelia farm to EBI. Update the API to use the new site.
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```
This is what I try:
> interproscan.sh -i test.fa -f tsv --goterms --pathways
Welcome to InterProScan 5RC4
Running the following analyses:
[jobProDom-2006.1, jobPanther-7.2, jobGene3d-3.3.0, jobSMA…
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```
InterProScan version 5.9-50.0 is affected by this.
The PIRSF matches itself are OK and valid, but the Evalue shown in the result
files (TSV, GFF3 or XML) is incorrect.
It doesn't matter if you …