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Dear @rhancockn, @neurosutton, @bpinsard
@Remi-Gau and I are trying to get the HCPPipelines bids-app updated and tested again :)
We are currently running into the problem that the test data is …
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Over in bids-standard/pybids#357, we've been having a small discussion over the precedence of metadata when JSON sidecars and NIfTI disagree. Specifically the question was whether to take the 4th pixd…
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Write a Dockerfile to containerize the dependencies and simplify usage as a BIDS App.
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### Describe your problem in detail.
Taking the first example I can find:
BROCCOLI
- workflow: https://github.com/bids-apps/BROCCOLI/blob/master/circle.yml
- dataset: https://dl.dropboxusercon…
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See: https://github.com/BIDS-Apps/freesurfer/pull/16#issuecomment-274333448
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Hello
I am new to BIDS and plan to update all my custom spm scripts to run on BIDS data.
BIDS-Apps/SPM seems to be a first step in this direction, but running on some of my data (one subject, one …
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## Summary
When running reconstruction using qsiprep for pyafq_tractography it seems that the custom config (given by --recon-spec) is not read correctly.
## Additional details
- QSIPrep version:…
jk619 updated
3 months ago
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BIDS is a structure for organizing data and metadata. There are some BEPs that go beyond this to do something quite different:
* BIDS StatsModels (BEP 002) is a specification of intended processing…
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### What would you like to see added in this software?
I have a suggestion that might improve both accuracy and execution speed of the gradient non-linearity distortion correction workflow.
It wou…
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# The Positron Emission Tomography Brain imaging Data structure (PET-BIDS) extension: A new standard for sharing PET data
***By Melanie Ganz, Neurobiology Research Unit, Rigshospital, Copenhagen, Denm…