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Hi,In the reported paper "Reconstruction and analysis of a Kluyveromyces marxianus genome-scale metabolic model", ``r_1912`` is the biomass production reaction in which the protein coefficient is the …
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I was just counting seconds in my head, but it took around 15-20 seconds to run the cell after selecting it.
[slowFirstCell.log](https://github.com/microsoft/vscode-jupyter/files/14579066/slowFirst…
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Please note I'm using google colab, as per instructions in "https://github.com/elsampsa/valkka-core" and can not get past the first statement:
![image](https://github.com/user-attachments/assets/2e54…
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Hi velocyto team,
I have a quick question regarding the pre-velocyto process using cell ranger. The new Cell Ranger 5.0 has a new "**include-introns**" option for counting intronic reads.
https://…
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The code does not stop, but it gave a "could not retrieve index file for cellsorted_possorted_genome_bam.bam" I did not do the sorting before running velocyto. Should I be worried?
2024-01-13 14:54…
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### Search before asking
- [X] I have searched the Ultralytics YOLO [issues](https://github.com/ultralytics/ultralytics/issues) and [discussions](https://github.com/ultralytics/ultralytics/discussi…
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Arguments for hundreds of types is present across the literature:
"Of the estimated several million neurons lining the olfactory cleft, there exist approximately 350 functionally distinct “types”…
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I tried to run velocyto run10x to generate loom from the outputs of a cellranger run. It successfully generated the cellsorted bam, but it quit during counting. I tried it twice but it failed again. T…
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- [x] Read Cell Voltage
- [x] Read Current
- [x] Coulomb counting
- [x] Gain Control
- [ ] Fault algorithm -Andrew Thornborough
- [x] Bypass algorithm
- [ ] Charge Control -Andrew Thornborough
- [ ] …
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Frequency Tables are very powerfull tool - a very good concept by the way.
This feature request addresses more flexibility. The cells are currently doing counting only. It would be very helpful to ha…